RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CRTAMO95727 393 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 PAMP19021 973 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 LTBRP36941 435 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 STAT3P40763 770 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 KCNAB2Q13303 367 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 INF2Q27J81 1249 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 E4F1Q66K89 784 aaPredicted RBP6.57□□□□□ -1.36
PRPF39-212ENST00000557477 CNNM4Q6P4Q7 775 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 ZNF574Q6ZN55 896 aaPredicted RBP6.57□□□□□ -1.36
PRPF39-212ENST00000557477 LRRTM3Q86VH5 581 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 CPNE8Q86YQ8 564 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 WFDC3Q8IUB2 231 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 NAT16Q8N8M0 369 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 TMEM52Q8NDY8 209 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 BCL7CQ8WUZ0 217 aaPredicted RBP6.57□□□□□ -1.36
PRPF39-212ENST00000557477 DIO2Q92813 273 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 TMX1Q9H3N1 280 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 CARS2Q9HA77 564 aaKnown RBP6.57□□□□□ -1.36
PRPF39-212ENST00000557477 GPR27Q9NS67 375 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 INTS7Q9NVH2 962 aaKnown RBP6.57□□□□□ -1.36
PRPF39-212ENST00000557477 BSDC1Q9NW68 430 aaPredicted RBP6.57□□□□□ -1.36
PRPF39-212ENST00000557477 ZNF281Q9Y2X9 895 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 PCDHA9Q9Y5H5 950 aa6.57□□□□□ -1.36
PRPF39-212ENST00000557477 TNPO3Q9Y5L0 923 aaKnown RBP6.57□□□□□ -1.36
PRPF39-212ENST00000557477 hCG_2014768A0A024R1R8 64 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 TCRBV16S1A1N1A0A5B0 115 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 AQP7O14520 342 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 MED26O95402 600 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 SSTR4P31391 388 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 INTS5Q6P9B9 1019 aaKnown RBP6.56□□□□□ -1.36
PRPF39-212ENST00000557477 KRT26Q7Z3Y9 468 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 RNF180Q86T96 592 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 UBR7Q8N806 425 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 RCBTB1Q8NDN9 531 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 ZCRB1Q8TBF4 217 aaKnown RBP6.56□□□□□ -1.36
PRPF39-212ENST00000557477 MISP3Q96FF7 219 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
PRPF39-212ENST00000557477 MMP19Q99542 508 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 G6PC3Q9BUM1 346 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 BRINP2Q9C0B6 783 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 NOP58Q9Y2X3 529 aaKnown RBP6.56□□□□□ -1.36
PRPF39-212ENST00000557477 PCDHA8Q9Y5H6 950 aa6.56□□□□□ -1.36
PRPF39-212ENST00000557477 OPA1O60313 960 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 CD8BP10966 210 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 ENDOUP21128 410 aaKnown RBP6.55□□□□□ -1.36
PRPF39-212ENST00000557477 IBSPP21815 317 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-212ENST00000557477 GPR85P60893 370 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 GUCY1A3Q02108 690 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 RSPO2Q6UXX9 243 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-212ENST00000557477 CYP2R1Q6VVX0 501 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 SPRED2Q7Z698 418 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 CHAC2Q8WUX2 184 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 MAGEB10Q96LZ2 347 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-212ENST00000557477 EBF1Q9UH73 591 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 FBXL7Q9UJT9 491 aa6.55□□□□□ -1.36
PRPF39-212ENST00000557477 ASLP04424 464 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 POU3F3P20264 500 aaPredicted RBP6.54□□□□□ -1.36
PRPF39-212ENST00000557477 CNGA1P29973 690 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 IGFALSP35858 605 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 ABHD17CQ6PCB6 329 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 LBX2Q6XYB7 198 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 MTDHQ86UE4 582 aaKnown RBP6.54□□□□□ -1.36
PRPF39-212ENST00000557477 IFNL3Q8IZI9 196 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRPF39-212ENST00000557477 DDX1Q92499 740 aaKnown RBP6.54□□□□□ -1.36
PRPF39-212ENST00000557477 MAP6Q96JE9 813 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 ZFYVE21Q9BQ24 234 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 CAAP1Q9H8G2 361 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 SLAMF8Q9P0V8 285 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
PRPF39-212ENST00000557477 PCDHA2Q9Y5H9 948 aa6.54□□□□□ -1.36
PRPF39-212ENST00000557477 TRBV23OR9-2A0A075B6M9 112 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 C7orf72A4D263 438 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 ARVCFO00192 962 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 TBC1D8O95759 1140 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 IGBP1P78318 339 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 ZP2Q05996 745 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 PCBP1Q15365 356 aaKnown RBP eCLIP6.53□□□□□ -1.36
PRPF39-212ENST00000557477 RALGPS1Q5JS13 557 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 IQCEQ6IPM2 695 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 NFXL1Q6ZNB6 911 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
PRPF39-212ENST00000557477 STK11IPQ8N1F8 1099 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 HHIPL1Q96JK4 782 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 ADAMTS10Q9H324 1103 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 PRDM7Q9NQW5 492 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 MAPRE3Q9UPY8 281 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 SLC5A6Q9Y289 635 aa6.53□□□□□ -1.36
PRPF39-212ENST00000557477 KPNA6O60684 536 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 USP2O75604 605 aaPredicted RBP6.52□□□□□ -1.37
PRPF39-212ENST00000557477 PRNPP04156 253 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 ZGLP1P0C6A0 271 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 JMJD7P0C870 316 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 KCNA6P17658 529 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 SOX5P35711 763 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 CD97P48960 835 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 ANAPC15P60006 121 aa6.52□□□□□ -1.37
PRPF39-212ENST00000557477 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms