RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 ZMYND12Q9H0C1 365 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 PSTPIP2Q9H939 334 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 PCDHA4Q9UN74 947 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 KCNJ14Q9UNX9 436 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 RIPK3Q9Y572 518 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 MYH15Q9Y2K3 1946 aa11.17□□□□□ -0.62
TMEM260-213ENST00000556929 VPS37CA5D8V6 355 aaPredicted RBP11.16□□□□□ -0.62
TMEM260-213ENST00000556929 GCOM1H8Y6P7 765 aaPredicted RBP11.16□□□□□ -0.62
TMEM260-213ENST00000556929 STX6O43752 255 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 PEX10O60683 326 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 TBC1D8O95759 1140 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 CFBP00751 764 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 POLR2MP0CAP2 368 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 MAPK4P31152 587 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 KRT2P35908 639 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 GUCY1B3Q02153 619 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 MUM1L1Q5H9M0 696 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 WDR78Q5VTH9 848 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 BLIDQ8IZY5 108 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 DAGLBQ8NCG7 672 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 GJB4Q9NTQ9 266 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 IVNS1ABPQ9Y6Y0 642 aa11.16□□□□□ -0.62
TMEM260-213ENST00000556929 STRNO43815 780 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 FCER1AP12319 257 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 TAL1P17542 331 aaPredicted RBP11.15□□□□□ -0.62
TMEM260-213ENST00000556929 NUCB2P80303 420 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 SP3Q02447 781 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 KCTD2Q14681 263 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 KIF22Q14807 665 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 NSMFQ6X4W1 530 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 RNF207Q6ZRF8 634 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.15□□□□□ -0.62
TMEM260-213ENST00000556929 DIS3L2Q8IYB7 885 aaKnown RBP11.15□□□□□ -0.62
TMEM260-213ENST00000556929 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
TMEM260-213ENST00000556929 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 CLEC4DQ8WXI8 215 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 MS4A3Q96HJ5 214 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 EFCC1Q9HA90 598 aa11.15□□□□□ -0.62
TMEM260-213ENST00000556929 ZNF236Q9UL36 1845 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 PFASO15067 1338 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 SPDYE3A6NKU9 549 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 NFIBO00712 420 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 MEIS2O14770 477 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 FOSP01100 380 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-213ENST00000556929 HSD17B4P51659 736 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 NUBP1P53384 320 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 GHRHRQ02643 423 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 MCTP1Q6DN14 999 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 MMP19Q99542 508 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 PORCNQ9H237 461 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 FOXP1Q9H334 677 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-213ENST00000556929 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
TMEM260-213ENST00000556929 BIN2Q9UBW5 565 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-213ENST00000556929 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
TMEM260-213ENST00000556929 MYH7BA7E2Y1 1941 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 LCTP09848 1927 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 BTBD18B2RXH4 712 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 OPLAHO14841 1288 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 ZSCAN22P10073 491 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 PTPREP23469 700 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 FCGRTP55899 365 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 RPS6P62753 249 aaKnown RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 BAATQ14032 418 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 ARHGEF6Q15052 776 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 NOM1Q5C9Z4 860 aaKnown RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 JAKMIP3Q5VZ66 844 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 KRT25Q7Z3Z0 450 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 GPR142Q7Z601 462 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 TBC1D5Q92609 795 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 MPHOSPH6Q99547 160 aaKnown RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 R3HDMLQ9H3Y0 253 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 ZSCAN16Q9H4T2 348 aaPredicted RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
TMEM260-213ENST00000556929 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 SLC5A4Q9NY91 659 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 CYP39A1Q9NYL5 469 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 PCDHA6Q9UN73 950 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 PCDHA8Q9Y5H6 950 aa11.13□□□□□ -0.63
TMEM260-213ENST00000556929 ZSWIM8A7E2V4 1837 aa11.12□□□□□ -0.63
TMEM260-213ENST00000556929 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
TMEM260-213ENST00000556929 B4DLN1 442 aa11.12□□□□□ -0.63
TMEM260-213ENST00000556929 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
TMEM260-213ENST00000556929 M0R2N6 131 aa11.12□□□□□ -0.63
TMEM260-213ENST00000556929 GPR25O00155 361 aa11.12□□□□□ -0.63
TMEM260-213ENST00000556929 TNPO2O14787 897 aaKnown RBP11.12□□□□□ -0.63
TMEM260-213ENST00000556929 FKTNO75072 461 aa11.12□□□□□ -0.63
TMEM260-213ENST00000556929 HOXA13P31271 388 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms