RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 KRT2P35908 639 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 NLRP5P59047 1200 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 SNAP25P60880 206 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 NUCB2P80303 420 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 PLS1Q14651 629 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 USH1GQ495M9 461 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 REXO1Q8N1G1 1221 aaKnown RBP12.92□□□□□ -0.34
FOXN3-212ENST00000556541 DNERQ8NFT8 737 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 CPA4Q9UI42 421 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 DIS3Q9Y2L1 958 aaKnown RBP12.92□□□□□ -0.34
FOXN3-212ENST00000556541 LRRC37A2A6NM11 1700 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 SLC15A5A6NIM6 579 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 H3BQV1 296 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 NFIBO00712 420 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 BRD1O95696 1058 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 HOXC6P09630 235 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 FCER1AP12319 257 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 PTPREP23469 700 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 IRF5Q13568 498 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 GRB14Q14449 540 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 MUM1L1Q5H9M0 696 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-212ENST00000556541 RNF207Q6ZRF8 634 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 KRT25Q7Z3Z0 450 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 BRAPQ7Z569 592 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 PLEKHH3Q7Z736 793 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-212ENST00000556541 NCAPG2Q86XI2 1143 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 SOCS4Q8WXH5 440 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 PORCNQ9H237 461 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-212ENST00000556541 A1CFQ9NQ94 594 aaKnown RBP12.91□□□□□ -0.34
FOXN3-212ENST00000556541 CYP39A1Q9NYL5 469 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 MTMR6Q9Y217 621 aa12.91□□□□□ -0.34
FOXN3-212ENST00000556541 RPTORQ8N122 1335 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 GPR25O00155 361 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 TRPA1O75762 1119 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 TRAPPC10P48553 1259 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 RPS6P62753 249 aaKnown RBP12.9□□□□□ -0.34
FOXN3-212ENST00000556541 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-212ENST00000556541 SP3Q02447 781 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-212ENST00000556541 KCTD2Q14681 263 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 MORN1Q5T089 497 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 XRRA1Q6P2D8 792 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 GPR142Q7Z601 462 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 DIS3L2Q8IYB7 885 aaKnown RBP12.9□□□□□ -0.34
FOXN3-212ENST00000556541 MSL3Q8N5Y2 521 aaKnown RBP12.9□□□□□ -0.34
FOXN3-212ENST00000556541 FAM133AQ8N9E0 248 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 SYTL5Q8TDW5 730 aaPredicted RBP12.9□□□□□ -0.34
FOXN3-212ENST00000556541 CRYGNQ8WXF5 182 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 USP6NLQ92738 828 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 EHMT1Q9H9B1 1298 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 IVNS1ABPQ9Y6Y0 642 aa12.9□□□□□ -0.34
FOXN3-212ENST00000556541 PPFIA3O75145 1194 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 ZSCAN22P10073 491 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-212ENST00000556541 SREBF1P36956 1147 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 PRMT2P55345 433 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 FCGRTP55899 365 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 KIF22Q14807 665 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 MOXD1Q6UVY6 613 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 MORC4Q8TE76 937 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 ERO1AQ96HE7 468 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 IWS1Q96ST2 819 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 MMP19Q99542 508 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 EFCC1Q9HA90 598 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 SLC5A4Q9NY91 659 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 ADD3Q9UEY8 706 aaKnown RBP12.89□□□□□ -0.35
FOXN3-212ENST00000556541 PCDHA6Q9UN73 950 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 KCNJ14Q9UNX9 436 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 PCDHA8Q9Y5H6 950 aa12.89□□□□□ -0.35
FOXN3-212ENST00000556541 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-212ENST00000556541 KIAA1217Q5T5P2 1943 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 BTBD18B2RXH4 712 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 B4DLN1 442 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 FKTNO75072 461 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 STAM2O75886 525 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 CFBP00751 764 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 CYP3A4P08684 503 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 XRCC5P13010 732 aaKnown RBP12.88□□□□□ -0.35
FOXN3-212ENST00000556541 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 USP11P51784 963 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 BAATQ14032 418 aaPredicted RBP12.88□□□□□ -0.35
FOXN3-212ENST00000556541 ZNF792Q3KQV3 632 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
FOXN3-212ENST00000556541 ANKRD35Q8N283 1001 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 NAP1L4Q99733 375 aaKnown RBP12.88□□□□□ -0.35
FOXN3-212ENST00000556541 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 HOMER2Q9NSB8 354 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 GJB4Q9NTQ9 266 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 CHMP5Q9NZZ3 219 aa12.88□□□□□ -0.35
FOXN3-212ENST00000556541 CCDC194A0A1B0GVG4 234 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms