RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MAP3K14Q99558 947 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 C11orf49Q9H6J7 331 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 JMJD4Q9H9V9 463 aa13.43□□□□□ -0.26
SLIRP-205ENST00000556310 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-205ENST00000556310 ASTN1O14525 1302 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 LOC102724159A0A0B4J2E5 919 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 ASB14A6NK59 587 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 DNM1LO00429 736 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 RARBP10826 455 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 COL6A1P12109 1028 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 LIFRP42702 1097 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 PWP2Q15269 919 aaKnown RBP13.42□□□□□ -0.26
SLIRP-205ENST00000556310 USH1GQ495M9 461 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 SLC30A10Q6XR72 485 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 TMTC2Q8N394 836 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 MTMR8Q96EF0 704 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 MAF1Q9H063 256 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 ABHD16BQ9H3Z7 469 aa13.42□□□□□ -0.26
SLIRP-205ENST00000556310 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-205ENST00000556310 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-205ENST00000556310 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 ACVR2BQ13705 512 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 BAATQ14032 418 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-205ENST00000556310 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 RNF207Q6ZRF8 634 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 FBXO11Q86XK2 927 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 ARRDC4Q8NCT1 418 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 CTCFLQ8NI51 663 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-205ENST00000556310 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 KCNB2Q92953 911 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 XPNPEP3Q9NQH7 507 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
SLIRP-205ENST00000556310 FAM184BQ9ULE4 1060 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 DNAH12Q6ZR08 3092 aa13.41□□□□□ -0.26
SLIRP-205ENST00000556310 KBTBD13C9JR72 458 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 ZBTB5O15062 677 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 EPB41L2O43491 1005 aaKnown RBP13.4□□□□□ -0.26
SLIRP-205ENST00000556310 KIF5BP33176 963 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 HSPA4P34932 840 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
SLIRP-205ENST00000556310 RPS6P62753 249 aaKnown RBP13.4□□□□□ -0.26
SLIRP-205ENST00000556310 SLC35G1Q2M3R5 365 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 ADCK5Q3MIX3 580 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 DPF3Q92784 378 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 MYL10Q9BUA6 226 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 VAT1LQ9HCJ6 419 aa13.4□□□□□ -0.26
SLIRP-205ENST00000556310 MRPL11Q9Y3B7 192 aaKnown RBP13.4□□□□□ -0.26
SLIRP-205ENST00000556310 CYTH3O43739 400 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
SLIRP-205ENST00000556310 CALM1P0DP23 149 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 CALM2P0DP24 149 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 CALM3P0DP25 149 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 CALML3P27482 149 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-205ENST00000556310 TRAF1Q13077 416 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 LRRC41Q15345 812 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 GJC2Q5T442 439 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-205ENST00000556310 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
SLIRP-205ENST00000556310 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 MCF2L2Q86YR7 1114 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 DNERQ8NFT8 737 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
SLIRP-205ENST00000556310 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
SLIRP-205ENST00000556310 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 OCEL1Q9H607 264 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 SLC12A7Q9Y666 1083 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 SYNRGQ9UMZ2 1314 aa13.39□□□□□ -0.27
SLIRP-205ENST00000556310 EVI5O60447 810 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 PPP1R11O60927 126 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-205ENST00000556310 ADAMTS4O75173 837 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 DUSP11O75319 330 aaKnown RBP13.38□□□□□ -0.27
SLIRP-205ENST00000556310 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 GNAQP50148 359 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 EXOSC10Q01780 885 aaKnown RBP13.38□□□□□ -0.27
SLIRP-205ENST00000556310 GHRHRQ02643 423 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 RNF180Q86T96 592 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 PIGSQ96S52 555 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 MPHOSPH6Q99547 160 aaKnown RBP13.38□□□□□ -0.27
SLIRP-205ENST00000556310 LZTS2Q9BRK4 669 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 VTA1Q9NP79 307 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 SNX14Q9Y5W7 946 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 KIAA1217Q5T5P2 1943 aa13.38□□□□□ -0.27
SLIRP-205ENST00000556310 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
SLIRP-205ENST00000556310 OPLAHO14841 1288 aa13.37□□□□□ -0.27
SLIRP-205ENST00000556310 ADCY6O43306 1168 aa13.37□□□□□ -0.27
SLIRP-205ENST00000556310 SEC24BO95487 1268 aa13.37□□□□□ -0.27
SLIRP-205ENST00000556310 PGK1P00558 417 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms