RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 CTDP1Q9Y5B0 961 aaPredicted RBP6.97□□□□□ -1.29
PRKCH-220ENST00000556164 SLC4A4Q9Y6R1 1079 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 ELP1O95163 1332 aa6.97□□□□□ -1.29
PRKCH-220ENST00000556164 SCN5AQ14524 2016 aa6.96□□□□□ -1.29
PRKCH-220ENST00000556164 DNAJC25-GNG10A0A024R161 153 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ANKRD33BA6NCL7 494 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ARVCFO00192 962 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ADCY6O43306 1168 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ZBED4O75132 1171 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 RECKO95980 971 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 CHGBP05060 677 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 CYP2C18P33260 490 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 TIE1P35590 1138 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 CDK7P50613 346 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 MRPS5P82675 430 aaKnown RBP6.96□□□□□ -1.3
PRKCH-220ENST00000556164 SEMA3FQ13275 785 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 RAB30Q15771 203 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 CSPP1Q1MSJ5 1256 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 CCDC144BQ3MJ40 725 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 GNASQ5JWF2 1037 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 RASIP1Q5U651 963 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 CTR9Q6PD62 1173 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 MAMDC4Q6UXC1 1216 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 C16orf59Q7L2K0 433 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ARMCX2Q7L311 632 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 FAM126BQ8IXS8 530 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ANKRD35Q8N283 1001 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 PANK1Q8TE04 598 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ASB2Q96Q27 587 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 MTIF3Q9H2K0 278 aaKnown RBP6.96□□□□□ -1.3
PRKCH-220ENST00000556164 NKX2-4Q9H2Z4 354 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ABHD16BQ9H3Z7 469 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 RAVER2Q9HCJ3 691 aaKnown RBP6.96□□□□□ -1.3
PRKCH-220ENST00000556164 ARPP21Q9UBL0 812 aaPredicted RBP6.96□□□□□ -1.3
PRKCH-220ENST00000556164 RIPK3Q9Y572 518 aa6.96□□□□□ -1.3
PRKCH-220ENST00000556164 NCOR1O75376 2440 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 F5H6K3 240 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 NDUFB10O96000 172 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 GJA9P57773 515 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 BEX3Q00994 111 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 KLRC3Q07444 240 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 ADGRE1Q14246 886 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 COL19A1Q14993 1142 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 UBE3CQ15386 1083 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 NOL8Q76FK4 1167 aaKnown RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 NOP9Q86U38 636 aaKnown RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 CCDC144CPQ8IYA2 1237 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 MICALL1Q8N3F8 863 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 PRPF38AQ8NAV1 312 aaKnown RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 STK32AQ8WU08 396 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 PTCD2Q8WV60 388 aaKnown RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 HERVK_113Q902F9 699 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 KIFC2Q96AC6 838 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 FGD4Q96M96 766 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 UHRF1Q96T88 793 aaPredicted RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 HAUS7Q99871 368 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 UPF3AQ9H1J1 476 aaKnown RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 HIPK3Q9H422 1215 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 SLC28A3Q9HAS3 691 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 MKNK2Q9HBH9 465 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 IL23AQ9NPF7 189 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 HOMER2Q9NSB8 354 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 CXXC1Q9P0U4 656 aaPredicted RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 ISY1Q9ULR0 285 aaKnown RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 NOVA2Q9UNW9 492 aaKnown RBP6.95□□□□□ -1.3
PRKCH-220ENST00000556164 PCDHB15Q9Y5E8 787 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 LCTP09848 1927 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 ZBED9Q6R2W3 1325 aa6.95□□□□□ -1.3
PRKCH-220ENST00000556164 MUC3AQ02505 3323 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.94□□□□□ -1.3
PRKCH-220ENST00000556164 MINDY4BA8MYZ0 360 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 ATP2A1O14983 1001 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 HMMRO75330 724 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 CD4P01730 458 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 FGBP02675 491 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 C7P10643 843 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 ATP5JP18859 108 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 RASA1P20936 1047 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 CCL23P55773 120 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 ZSCAN25Q6NSZ9 544 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 TYW1BQ6NUM6 668 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 PADI6Q6TGC4 694 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 CXCL17Q6UXB2 119 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 OTOP2Q7RTS6 562 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 CHST13Q8NET6 341 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 CLP1Q92989 425 aaKnown RBP6.94□□□□□ -1.3
PRKCH-220ENST00000556164 PUS7LQ9H0K6 701 aaKnown RBP6.94□□□□□ -1.3
PRKCH-220ENST00000556164 SLC38A10Q9HBR0 1119 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 NYAP2Q9P242 653 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 FBXO40Q9UH90 709 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 FEM1BQ9UK73 627 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 YBX2Q9Y2T7 364 aaKnown RBP6.94□□□□□ -1.3
PRKCH-220ENST00000556164 TRIP12Q14669 1992 aaPredicted RBP6.94□□□□□ -1.3
PRKCH-220ENST00000556164 UMODL1Q5DID0 1318 aa6.94□□□□□ -1.3
PRKCH-220ENST00000556164 PRRC2BQ5JSZ5 2229 aaKnown RBP6.93□□□□□ -1.3
PRKCH-220ENST00000556164 ZBBXA8MT70 800 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 CTAGE5O15320 804 aa6.93□□□□□ -1.3
PRKCH-220ENST00000556164 PRDM1O75626 825 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms