RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 GRB14Q14449 540 aa8.78□□□□□ -1
TDP1-214ENST00000556063 PKN1Q16512 942 aa8.78□□□□□ -1
TDP1-214ENST00000556063 PKN2Q16513 984 aaKnown RBP8.78□□□□□ -1
TDP1-214ENST00000556063 WWC2Q6AWC2 1192 aa8.78□□□□□ -1
TDP1-214ENST00000556063 GALNT17Q6IS24 598 aa8.78□□□□□ -1
TDP1-214ENST00000556063 TRMT44Q8IYL2 757 aaKnown RBP8.78□□□□□ -1
TDP1-214ENST00000556063 SMARCC2Q8TAQ2 1214 aa8.78□□□□□ -1
TDP1-214ENST00000556063 CLEC4DQ8WXI8 215 aa8.78□□□□□ -1
TDP1-214ENST00000556063 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
TDP1-214ENST00000556063 INTS4Q96HW7 963 aaKnown RBP8.78□□□□□ -1
TDP1-214ENST00000556063 TRIM47Q96LD4 638 aa8.78□□□□□ -1
TDP1-214ENST00000556063 ALG1Q9BT22 464 aa8.78□□□□□ -1
TDP1-214ENST00000556063 PSTPIP2Q9H939 334 aa8.78□□□□□ -1
TDP1-214ENST00000556063 BRMS1Q9HCU9 246 aa8.78□□□□□ -1
TDP1-214ENST00000556063 A1CFQ9NQ94 594 aaKnown RBP8.78□□□□□ -1
TDP1-214ENST00000556063 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
TDP1-214ENST00000556063 ADD3Q9UEY8 706 aaKnown RBP8.78□□□□□ -1
TDP1-214ENST00000556063 SRRDQ9UH36 339 aa8.78□□□□□ -1
TDP1-214ENST00000556063 DIS3Q9Y2L1 958 aaKnown RBP8.78□□□□□ -1
TDP1-214ENST00000556063 TRIM17Q9Y577 477 aa8.78□□□□□ -1
TDP1-214ENST00000556063 LOC102724159A0A0B4J2E5 919 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 SMCO2A6NFE2 343 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 STXBP3O00186 592 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 NFIBO00712 420 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 JAK2O60674 1132 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 XRCC5P13010 732 aaKnown RBP8.77□□□□□ -1.01
TDP1-214ENST00000556063 PDCP20941 246 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 ADORA2AP29274 412 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 FLT3LGP49771 235 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 ADCY7P51828 1080 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 NLRP5P59047 1200 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 RPS6P62753 249 aaKnown RBP8.77□□□□□ -1.01
TDP1-214ENST00000556063 IRF5Q13568 498 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 BAATQ14032 418 aaPredicted RBP8.77□□□□□ -1.01
TDP1-214ENST00000556063 PWP2Q15269 919 aaKnown RBP8.77□□□□□ -1.01
TDP1-214ENST00000556063 SAFBQ15424 915 aaKnown RBP eCLIP8.77□□□□□ -1.01
TDP1-214ENST00000556063 MUM1L1Q5H9M0 696 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 MORN1Q5T089 497 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 CTU1Q7Z7A3 348 aaKnown RBP8.77□□□□□ -1.01
TDP1-214ENST00000556063 RAET1EQ8TD07 263 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 APBA2Q99767 749 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 ARHGAP39Q9C0H5 1083 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 ZMYND12Q9H0C1 365 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 EHMT1Q9H9B1 1298 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 CYP39A1Q9NYL5 469 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 PLXNB2O15031 1838 aa8.77□□□□□ -1.01
TDP1-214ENST00000556063 SPDYE3A6NKU9 549 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 HAX1O00165 279 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 FOSP01100 380 aaPredicted RBP8.76□□□□□ -1.01
TDP1-214ENST00000556063 HOXC6P09630 235 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 PDIA4P13667 645 aaKnown RBP8.76□□□□□ -1.01
TDP1-214ENST00000556063 HSD17B4P51659 736 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 GHRHRQ02643 423 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 ST3GAL1Q11201 340 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 OTOP1Q7RTM1 612 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 ZNF467Q7Z7K2 595 aaPredicted RBP8.76□□□□□ -1.01
TDP1-214ENST00000556063 REXO1Q8N1G1 1221 aaKnown RBP8.76□□□□□ -1.01
TDP1-214ENST00000556063 MSL3Q8N5Y2 521 aaKnown RBP8.76□□□□□ -1.01
TDP1-214ENST00000556063 DNERQ8NFT8 737 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 NSUN6Q8TEA1 469 aaKnown RBP8.76□□□□□ -1.01
TDP1-214ENST00000556063 C8orf76Q96K31 380 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 RIC8AQ9NPQ8 531 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 VPS54Q9P1Q0 977 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 GJD2Q9UKL4 321 aa8.76□□□□□ -1.01
TDP1-214ENST00000556063 ZNF236Q9UL36 1845 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 DNAJC25-GNG10A0A024R161 153 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 ASB14A6NK59 587 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 PGK2P07205 417 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 FDPSP14324 419 aaKnown RBP8.75□□□□□ -1.01
TDP1-214ENST00000556063 TAL1P17542 331 aaPredicted RBP8.75□□□□□ -1.01
TDP1-214ENST00000556063 CYP2B6P20813 491 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 GJB2P29033 226 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 CTGFP29279 349 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 PRKCZQ05513 592 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 AP3B2Q13367 1082 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 GNL2Q13823 731 aaKnown RBP8.75□□□□□ -1.01
TDP1-214ENST00000556063 ZNF792Q3KQV3 632 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 ARHGEF16Q5VV41 709 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 MFSD14CQ5VZR4 134 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 LARP1BQ659C4 914 aaKnown RBP8.75□□□□□ -1.01
TDP1-214ENST00000556063 FCHSD1Q86WN1 690 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 FAM133AQ8N9E0 248 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 SLAIN1Q8ND83 568 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 SYTL5Q8TDW5 730 aaPredicted RBP8.75□□□□□ -1.01
TDP1-214ENST00000556063 PXYLP1Q8TE99 480 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 USP6NLQ92738 828 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 RMDN3Q96TC7 470 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 PCDHA4Q9UN74 947 aa8.75□□□□□ -1.01
TDP1-214ENST00000556063 PLXNA1Q9UIW2 1896 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 RBBP6Q7Z6E9 1792 aaKnown RBP8.74□□□□□ -1.01
TDP1-214ENST00000556063 H3BQV1 296 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 MEIS2O14770 477 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 OPLAHO14841 1288 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 ADCY3O60266 1144 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 COBLO75128 1261 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 HOXA13P31271 388 aaPredicted RBP8.74□□□□□ -1.01
TDP1-214ENST00000556063 KRT2P35908 639 aa8.74□□□□□ -1.01
TDP1-214ENST00000556063 IFFO2Q5TF58 517 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms