RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SENP2Q9HC62 589 aa11.18□□□□□ -0.62
ACTN1-215ENST00000555616 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
ACTN1-215ENST00000555616 ADD3Q9UEY8 706 aaKnown RBP11.18□□□□□ -0.62
ACTN1-215ENST00000555616 MAD2L2Q9UI95 211 aa11.18□□□□□ -0.62
ACTN1-215ENST00000555616 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-215ENST00000555616 TRIOBPQ9H2D6 2365 aa11.18□□□□□ -0.62
ACTN1-215ENST00000555616 PTPDC1A2A3K4 754 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 PALM3A6NDB9 673 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 PRC1O43663 620 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 EDNRBP24530 442 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 ADCYAP1R1P41586 468 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 ALDH5A1P51649 535 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 RPS6P62753 249 aaKnown RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 SLC35G1Q2M3R5 365 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 USH1GQ495M9 461 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 TMEM67Q5HYA8 995 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 C1orf53Q5VUE5 145 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 CCSAPQ6IQ19 270 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 HSCBQ8IWL3 235 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 KLHDC9Q8NEP7 349 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 TMEM87BQ96K49 555 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 PURBQ96QR8 312 aaKnown RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 GDF15Q99988 308 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 TSEN34Q9BSV6 310 aaKnown RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 LY9Q9HBG7 655 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 VTA1Q9NP79 307 aa11.17□□□□□ -0.62
ACTN1-215ENST00000555616 DDX49Q9Y6V7 483 aaKnown RBP11.17□□□□□ -0.62
ACTN1-215ENST00000555616 DNAH12Q6ZR08 3092 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 A0A1W2PPC1 479 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 A0A1W2PQ45 241 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 A0A1W2PQY0 241 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 MYADML2A6NDP7 307 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 MOXD2PA6NHM9 499 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 SH2B2O14492 632 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 ZBTB5O15062 677 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 CTAGE5O15320 804 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 DDAH1O94760 285 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 CPA1P15085 419 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 CALML3P27482 149 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 GJA9P57773 515 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 RTP1P59025 263 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 EXOSC10Q01780 885 aaKnown RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 GHRHRQ02643 423 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 COL9A3Q14050 684 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 TAPT1Q6NXT6 567 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 SLC39A5Q6ZMH5 540 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 CHST3Q7LGC8 479 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 FBXO11Q86XK2 927 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 FBXO16Q8IX29 292 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 DNERQ8NFT8 737 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 SNX21Q969T3 373 aa11.16□□□□□ -0.62
ACTN1-215ENST00000555616 IPO9Q96P70 1041 aaKnown RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 ALDH8A1Q9H2A2 487 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 GNEQ9Y223 722 aaKnown RBP11.16□□□□□ -0.62
ACTN1-215ENST00000555616 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-215ENST00000555616 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-215ENST00000555616 C6orf222P0C671 652 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-215ENST00000555616 SYN1P17600 705 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 BMP8BP34820 402 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 MAGEA10P43363 369 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-215ENST00000555616 ACLYP53396 1101 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 TNFAIP2Q03169 654 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 TRIM60Q495X7 471 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 CATIPQ7Z7H3 387 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 ZNF654Q8IZM8 581 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 FERMT2Q96AC1 680 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 MAP3K14Q99558 947 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 AMNQ9BXJ7 453 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 RIOX1Q9H6W3 641 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 SPC25Q9HBM1 224 aa11.15□□□□□ -0.62
ACTN1-215ENST00000555616 GPHNQ9NQX3 736 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-215ENST00000555616 MRPL11Q9Y3B7 192 aaKnown RBP11.15□□□□□ -0.62
ACTN1-215ENST00000555616 MCM3APO60318 1980 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 RBM47A0AV96 593 aaKnown RBP11.14□□□□□ -0.63
ACTN1-215ENST00000555616 OPLAHO14841 1288 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 CYTH3O43739 400 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 SMPD1P17405 629 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 AK2P54819 239 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 KCNA10Q16322 511 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 IQSEC1Q6DN90 963 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 Q6ZUG5 572 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 TLK2Q86UE8 772 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 MCF2L2Q86YR7 1114 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 TMTC2Q8N394 836 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 PCSK9Q8NBP7 692 aaKnown RBP11.14□□□□□ -0.63
ACTN1-215ENST00000555616 SYTL5Q8TDW5 730 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-215ENST00000555616 NUP133Q8WUM0 1156 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 TCEANC2Q96MN5 208 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 MPHOSPH6Q99547 160 aaKnown RBP11.14□□□□□ -0.63
ACTN1-215ENST00000555616 VAT1LQ9HCJ6 419 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 PDGFCQ9NRA1 345 aa11.14□□□□□ -0.63
ACTN1-215ENST00000555616 COL20A1Q9P218 1284 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms