RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 POTEB2H3BUK9 544 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 PIK3CDO00329 1044 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 HOXC6P09630 235 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 FLT3LGP49771 235 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 HSD17B4P51659 736 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 ADCY7P51828 1080 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
CHD8-208ENST00000555301 CAP1Q01518 475 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 PRKCZQ05513 592 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 BAATQ14032 418 aaPredicted RBP16.42■□□□□ 0.22
CHD8-208ENST00000555301 TRIM29Q14134 588 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 TYW1BQ6NUM6 668 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 OTOP1Q7RTM1 612 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 USP6NLQ92738 828 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 ZMYND12Q9H0C1 365 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
CHD8-208ENST00000555301 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
CHD8-208ENST00000555301 DNAJC25-GNG10A0A024R161 153 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 DTNBO60941 627 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 HSP90AA1P07900 732 aaKnown RBP16.41■□□□□ 0.22
CHD8-208ENST00000555301 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
CHD8-208ENST00000555301 CALML3P27482 149 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 NLRP5P59047 1200 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 IRF5Q13568 498 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 GALNT17Q6IS24 598 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 SLC30A10Q6XR72 485 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
CHD8-208ENST00000555301 BICD2Q8TD16 824 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 AIFM3Q96NN9 605 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 APBA2Q99767 749 aa16.41■□□□□ 0.22
CHD8-208ENST00000555301 ADD3Q9UEY8 706 aaKnown RBP16.41■□□□□ 0.22
CHD8-208ENST00000555301 COBLO75128 1261 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 PGK2P07205 417 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 CYP2B6P20813 491 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 GJB2P29033 226 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 TRMT44Q8IYL2 757 aaKnown RBP16.4■□□□□ 0.22
CHD8-208ENST00000555301 FAM133AQ8N9E0 248 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 RAET1EQ8TD07 263 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 SYTL5Q8TDW5 730 aaPredicted RBP16.4■□□□□ 0.22
CHD8-208ENST00000555301 TBC1D5Q92609 795 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 GABRQQ9UN88 632 aa16.4■□□□□ 0.22
CHD8-208ENST00000555301 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
CHD8-208ENST00000555301 MEIS2O14770 477 aa16.39■□□□□ 0.21
CHD8-208ENST00000555301 ANP32AP39687 249 aaKnown RBP16.39■□□□□ 0.21
CHD8-208ENST00000555301 PKN2Q16513 984 aaKnown RBP16.39■□□□□ 0.21
CHD8-208ENST00000555301 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
CHD8-208ENST00000555301 DNERQ8NFT8 737 aa16.39■□□□□ 0.21
CHD8-208ENST00000555301 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
CHD8-208ENST00000555301 MPHOSPH6Q99547 160 aaKnown RBP16.39■□□□□ 0.21
CHD8-208ENST00000555301 PHF20Q9BVI0 1012 aa16.39■□□□□ 0.21
CHD8-208ENST00000555301 PCDHA4Q9UN74 947 aa16.39■□□□□ 0.21
CHD8-208ENST00000555301 LOC102724159A0A0B4J2E5 919 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 B4DLN1 442 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
CHD8-208ENST00000555301 HOXA13P31271 388 aaPredicted RBP16.38■□□□□ 0.21
CHD8-208ENST00000555301 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 PWP2Q15269 919 aaKnown RBP16.38■□□□□ 0.21
CHD8-208ENST00000555301 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
CHD8-208ENST00000555301 DAGLBQ8NCG7 672 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 NPLOC4Q8TAT6 608 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 SHISA4Q96DD7 197 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 MAML3Q96JK9 1138 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 PTPN22Q9Y2R2 807 aa16.38■□□□□ 0.21
CHD8-208ENST00000555301 ASB14A6NK59 587 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 PDCP20941 246 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 CLK2P49760 499 aaKnown RBP16.37■□□□□ 0.21
CHD8-208ENST00000555301 CNTN2Q02246 1040 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 UBE2SQ16763 222 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 OLFML2BQ68BL8 750 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 KRT40Q6A162 431 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 FCHSD1Q86WN1 690 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 BLIDQ8IZY5 108 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 REXO1Q8N1G1 1221 aaKnown RBP16.37■□□□□ 0.21
CHD8-208ENST00000555301 FBXO18Q8NFZ0 1043 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 NSUN6Q8TEA1 469 aaKnown RBP16.37■□□□□ 0.21
CHD8-208ENST00000555301 RMDN3Q96TC7 470 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 EHMT1Q9H9B1 1298 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 COL20A1Q9P218 1284 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 KCNJ14Q9UNX9 436 aa16.37■□□□□ 0.21
CHD8-208ENST00000555301 ZNF236Q9UL36 1845 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 SOWAHBA6NEL2 793 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 ADCY3O60266 1144 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 MMP1P03956 469 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 ALDH5A1P51649 535 aaPredicted RBP16.36■□□□□ 0.21
CHD8-208ENST00000555301 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHD8-208ENST00000555301 ARHGEF16Q5VV41 709 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 SLAIN1Q8ND83 568 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 TAAR1Q96RJ0 339 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 GJB4Q9NTQ9 266 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 FOXD4L1Q9NU39 408 aa16.36■□□□□ 0.21
CHD8-208ENST00000555301 BAZ2BQ9UIF8 2168 aaKnown RBP16.36■□□□□ 0.21
CHD8-208ENST00000555301 KRT2P35908 639 aa16.35■□□□□ 0.21
CHD8-208ENST00000555301 LARP1BQ659C4 914 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms