RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 IFNL3Q8IZI9 196 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 CHAC2Q8WUX2 184 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 BCL7CQ8WUZ0 217 aaPredicted RBP7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 GPATCH3Q96I76 525 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 PCDH12Q9NPG4 1184 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 ERVK13-1Q9NX77 482 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 MAPRE3Q9UPY8 281 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 TRAF6Q9Y4K3 522 aa7.66□□□□□ -1.18
CKS1BP1-201ENST00000555221 A0A087X0B3 334 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 B4E1Z4 1266 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 MYO1BO43795 1136 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 PDE8AO60658 829 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 DNAJC8O75937 253 aaPredicted RBP7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 SDSP20132 328 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 SOX5P35711 763 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 FLT3P36888 993 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 STAT3P40763 770 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 ANAPC15P60006 121 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 IGBP1P78318 339 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 DUSP4Q13115 394 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 HLA-DQA1Q5Y7H0 255 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 KCNT2Q6UVM3 1135 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 MTDHQ86UE4 582 aaKnown RBP7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 THNSL2Q86YJ6 484 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 CCDC103Q8IW40 242 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 PPM1KQ8N3J5 372 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 CAAP1Q9H8G2 361 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 CARS2Q9HA77 564 aaKnown RBP7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 TNFRSF10DQ9UBN6 386 aa7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 TMEFF2Q9UIK5 374 aaPredicted RBP7.65□□□□□ -1.18
CKS1BP1-201ENST00000555221 ASXL2Q76L83 1435 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 OPA1O60313 960 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 CRTAMO95727 393 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 CNGA1P29973 690 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 IGFALSP35858 605 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 GUCY1A3Q02108 690 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 BNIP3Q12983 259 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 LAPTM5Q13571 262 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 CNNM4Q6P4Q7 775 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 ZPBP2Q6X784 338 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 FGD2Q7Z6J4 655 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 VSIG10LQ86VR7 867 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 AHI1Q8N157 1196 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 SCLYQ96I15 445 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 ALG1Q9BT22 464 aa7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 TARS2Q9BW92 718 aaKnown RBP7.64□□□□□ -1.19
CKS1BP1-201ENST00000555221 TCRBV16S1A1N1A0A5B0 115 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 GSG1L2A8MUP6 293 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 ARNTLO00327 626 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 RASGRP1O95267 797 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 GTF2A2P52657 109 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 ZP2Q05996 745 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 KIZQ2M2Z5 673 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 CT47A1Q5JQC4 288 aaPredicted RBP7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 LBX2Q6XYB7 198 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 CPNE8Q86YQ8 564 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 RCBTB1Q8NDN9 531 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 DDX1Q92499 740 aaKnown RBP7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 CCDC120Q96HB5 630 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 MAP6Q96JE9 813 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 PCDHA9Q9Y5H5 950 aa7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 TNPO3Q9Y5L0 923 aaKnown RBP7.63□□□□□ -1.19
CKS1BP1-201ENST00000555221 NPHS1O60500 1241 aa7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 CD8BP10966 210 aa7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 POU3F2P20265 443 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 KIR2DL1P43626 348 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 KIR2DL2P43627 348 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 UBE2R2Q712K3 238 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 DTX1Q86Y01 620 aa7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 JAMLQ86YT9 394 aa7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 ALPK1Q96QP1 1244 aa7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 PCDHA8Q9Y5H6 950 aa7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 PCDHA2Q9Y5H9 948 aa7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 TIMM13Q9Y5L4 95 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP1-201ENST00000555221 ARVCFO00192 962 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 NPTXRO95502 500 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 LCP1P13796 627 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 CD96P40200 585 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 RPL11P62913 178 aaKnown RBP7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 AMPD3Q01432 767 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 PAK1Q13153 545 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 INF2Q27J81 1249 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 RNF180Q86T96 592 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 TMEM52Q8NDY8 209 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 LINC01599Q8WXQ3 324 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 SLAMF8Q9P0V8 285 aa7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 ANGEL1Q9UNK9 670 aaKnown RBP7.61□□□□□ -1.19
CKS1BP1-201ENST00000555221 A0A1W2PQ45 241 aaPredicted RBP7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 A0A1W2PQY0 241 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 C7orf72A4D263 438 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 FADS2P1A8MWK0 482 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 SPINK2P20155 84 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 CD97P48960 835 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 NEK4P51957 841 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 ZNF460Q14592 562 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 MBLAC2Q68D91 279 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 SPRED2Q7Z698 418 aa7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 DDX53Q86TM3 631 aaKnown RBP7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 ZC3H7AQ8IWR0 971 aaKnown RBP7.6□□□□□ -1.19
CKS1BP1-201ENST00000555221 ANKS4BQ8N8V4 417 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms