RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 ARHGEF4Q9NR80 690 aa5.95□□□□□ -1.46
PPP4R3A-204ENST00000554574 PLAAQ9Y263 795 aa5.95□□□□□ -1.46
PPP4R3A-204ENST00000554574 FANCIQ9NVI1 1328 aa5.95□□□□□ -1.46
PPP4R3A-204ENST00000554574 VIL1P09327 827 aaKnown RBP5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 L1CAMP32004 1257 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 GBP1P32455 592 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 LMOD3Q0VAK6 560 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 YOD1Q5VVQ6 348 aaPredicted RBP5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 SMG8Q8ND04 991 aaKnown RBP5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 CYB5D2Q8WUJ1 264 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 TRIM11Q96F44 468 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZNF512BQ96KM6 892 aaPredicted RBP5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 LGR4Q9BXB1 951 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 RNF208Q9H0X6 261 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 SUGCTQ9HAC7 445 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 APEX2Q9UBZ4 518 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 TMEM94Q12767 1356 aa5.94□□□□□ -1.46
PPP4R3A-204ENST00000554574 LRRC37A3O60309 1634 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 ANKRD34BA5PLL1 514 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CBFA2T2O43439 604 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CLEC3AO75596 197 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 BCAR3O75815 825 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CST3P01034 146 aaPredicted RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CAP2P40123 477 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 AMPHP49418 695 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZNF143P52747 638 aaPredicted RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 RARSP54136 660 aaKnown RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 SOX4Q06945 474 aaPredicted RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 C20orf194Q5TEA3 1177 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 DCAF15Q66K64 600 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CDC37L1Q7L3B6 337 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 DYMQ7RTS9 669 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 DHX37Q8IY37 1157 aaKnown RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 XAGE3Q8WTP9 111 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 STAG1Q8WVM7 1258 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CWC22Q9HCG8 908 aaKnown RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CYP4F12Q9HCS2 524 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 CAMTA1Q9Y6Y1 1673 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 IGSF1Q8N6C5 1336 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 FAM208AQ9UK61 1670 aaKnown RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 MARCH6O60337 910 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 TIAF1O95411 115 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 HOXC9P31274 260 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 HSPA2P54652 639 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 RAC1P63000 192 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 TM4SF20Q53R12 229 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 FAM209AQ5JX71 171 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 SULT6B1Q6IMI4 303 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 KCNH5Q8NCM2 988 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 NINJ1Q92982 152 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 KISS1RQ969F8 398 aaPredicted RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 ORAI2Q96SN7 254 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 KLHL25Q9H0H3 589 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 GSX1Q9H4S2 264 aaPredicted RBP5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 FAM105AQ9NUU6 356 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 ACTL7BQ9Y614 415 aa5.93□□□□□ -1.46
PPP4R3A-204ENST00000554574 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 AGRPO00253 132 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 IRS4O14654 1257 aaPredicted RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 RNGTTO60942 597 aaKnown RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 ATF3P18847 181 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 PABPC4Q13310 644 aaKnown RBP eCLIP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZC3H12BQ5HYM0 836 aaKnown RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 HEATR6Q6AI08 1181 aaKnown RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 KRT26Q7Z3Y9 468 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 NIM1KQ8IY84 436 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZNF513Q8N8E2 541 aaPredicted RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 KCT2Q8NC54 265 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 C2CD4AQ8NCU7 369 aaPredicted RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 PPP1R13LQ8WUF5 828 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 TSR2Q969E8 191 aaKnown RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 MFSD3Q96ES6 412 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 FGD4Q96M96 766 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 APBA2Q99767 749 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 FAM126AQ9BYI3 521 aaPredicted RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 PIDD1Q9HB75 910 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 RRAGCQ9HB90 399 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 NCOA5Q9HCD5 579 aaKnown RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 DDX56Q9NY93 547 aaKnown RBP5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 MSH6P52701 1360 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 LMO7Q8WWI1 1683 aa5.92□□□□□ -1.46
PPP4R3A-204ENST00000554574 ITGAVP06756 1048 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZNF853P0CG23 659 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 NAT2P11245 290 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 GNAI1P63096 354 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 PPP2R2AP63151 447 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 EXOSC9Q06265 439 aaKnown RBP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 PLEKHG6Q3KR16 790 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 ZNF227Q86WZ6 799 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 THNSL2Q86YJ6 484 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 C12orf50Q8NA57 414 aaPredicted RBP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 SMARCC1Q92922 1105 aaPredicted RBP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 PPP1R14AQ96A00 147 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 FOXQ1Q9C009 403 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 MRPS23Q9Y3D9 190 aaKnown RBP5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 USP19O94966 1318 aa5.91□□□□□ -1.46
PPP4R3A-204ENST00000554574 COL18A1P39060 1754 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms