RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 C9orf50Q5SZB4 431 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 TLK2Q86UE8 772 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 DNERQ8NFT8 737 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 SEZ6LQ9BYH1 1024 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 CPVLQ9H3G5 476 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
ABCD4-221ENST00000554453 MROH7Q68CQ1 1323 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 RAD50Q92878 1312 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 SZT2Q5T011 3432 aa13.01□□□□□ -0.33
ABCD4-221ENST00000554453 TNKSO95271 1327 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 B4DLN1 442 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 EDNRBP24530 442 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 CALML3P27482 149 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
ABCD4-221ENST00000554453 PTH1RQ03431 593 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 FSCN1Q16658 493 aaKnown RBP13□□□□□ -0.33
ABCD4-221ENST00000554453 TMEM63BQ5T3F8 832 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 Q7L0L9 218 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 FBXO16Q8IX29 292 aaPredicted RBP13□□□□□ -0.33
ABCD4-221ENST00000554453 TBC1D5Q92609 795 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 UBAC1Q9BSL1 405 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 WDR11Q9BZH6 1224 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 TBX21Q9UL17 535 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 LCTP09848 1927 aa13□□□□□ -0.33
ABCD4-221ENST00000554453 SGSM2O43147 1006 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 CD4P01730 458 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 CYP21A2P08686 494 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 PARP1P09874 1014 aaKnown RBP12.99□□□□□ -0.33
ABCD4-221ENST00000554453 EPHB4P54760 987 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 TRDNQ13061 729 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 ITGA7Q13683 1181 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 IFIT1BQ5T764 474 aaKnown RBP12.99□□□□□ -0.33
ABCD4-221ENST00000554453 MFSD5Q6N075 450 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 CXCL17Q6UXB2 119 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 CYB5R4Q7L1T6 521 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 FAM126BQ8IXS8 530 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 MPHOSPH6Q99547 160 aaKnown RBP12.99□□□□□ -0.33
ABCD4-221ENST00000554453 JMJD4Q9H9V9 463 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 LTBP2Q14767 1821 aa12.99□□□□□ -0.33
ABCD4-221ENST00000554453 MYH6P13533 1939 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 GRIN2DO15399 1336 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 ABCB11O95342 1321 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 NKRFO15226 690 aaKnown RBP eCLIP12.98□□□□□ -0.33
ABCD4-221ENST00000554453 TLR3O15455 904 aaKnown RBP12.98□□□□□ -0.33
ABCD4-221ENST00000554453 PTGS1P23219 599 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 FPGSQ05932 587 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 PDE4DQ08499 809 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 CDC37Q16543 378 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-221ENST00000554453 QRICH1Q2TAL8 776 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 USH1GQ495M9 461 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 SLC30A10Q6XR72 485 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 STAG2Q8N3U4 1231 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 MTMR8Q96EF0 704 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 MRPL11Q9Y3B7 192 aaKnown RBP12.98□□□□□ -0.33
ABCD4-221ENST00000554453 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
ABCD4-221ENST00000554453 PALM3A6NDB9 673 aaPredicted RBP12.97□□□□□ -0.33
ABCD4-221ENST00000554453 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
ABCD4-221ENST00000554453 SMAD3P84022 425 aaKnown RBP12.97□□□□□ -0.33
ABCD4-221ENST00000554453 FBXO11Q86XK2 927 aa12.97□□□□□ -0.33
ABCD4-221ENST00000554453 MCF2L2Q86YR7 1114 aa12.97□□□□□ -0.33
ABCD4-221ENST00000554453 SYTL5Q8TDW5 730 aaPredicted RBP12.97□□□□□ -0.33
ABCD4-221ENST00000554453 SCFD2Q8WU76 684 aa12.97□□□□□ -0.33
ABCD4-221ENST00000554453 TAAR1Q96RJ0 339 aa12.97□□□□□ -0.33
ABCD4-221ENST00000554453 STXBP5LQ9Y2K9 1186 aa12.97□□□□□ -0.33
ABCD4-221ENST00000554453 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.96□□□□□ -0.33
ABCD4-221ENST00000554453 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.96□□□□□ -0.33
ABCD4-221ENST00000554453 PPIGQ13427 754 aaKnown RBP eCLIP12.96□□□□□ -0.331e-7■□□□□ 10.4
ABCD4-221ENST00000554453 C16orf59Q7L2K0 433 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 SAMD3Q8N6K7 520 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 NCOA7Q8NI08 942 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
ABCD4-221ENST00000554453 IWS1Q96ST2 819 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 AMNQ9BXJ7 453 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 POLR3EQ9NVU0 708 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 MAP3K20Q9NYL2 800 aaKnown RBP12.96□□□□□ -0.33
ABCD4-221ENST00000554453 MAD2L2Q9UI95 211 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 LAMA4Q16363 1823 aa12.96□□□□□ -0.33
ABCD4-221ENST00000554453 E7EWF7 191 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 IFIT3O14879 490 aaKnown RBP12.95□□□□□ -0.34
ABCD4-221ENST00000554453 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
ABCD4-221ENST00000554453 KPNA6O60684 536 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 TXNP10599 105 aaKnown RBP12.95□□□□□ -0.34
ABCD4-221ENST00000554453 CPT1AP50416 773 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 PURAQ00577 322 aaKnown RBP12.95□□□□□ -0.34
ABCD4-221ENST00000554453 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
ABCD4-221ENST00000554453 TMEM240Q5SV17 173 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 CCDC62Q6P9F0 684 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 TMEM199Q8N511 208 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 SLC17A8Q8NDX2 589 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 RNPC3Q96LT9 517 aaKnown RBP12.95□□□□□ -0.34
ABCD4-221ENST00000554453 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
ABCD4-221ENST00000554453 SCN10AQ9Y5Y9 1956 aa12.94□□□□□ -0.34
ABCD4-221ENST00000554453 ERICH2A1L162 156 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms