RNA–Protein interactions for RNA: ENST00000554289.1

LIN52-203, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 3

Gene LIN52, Length 271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-203ENST00000554289 MCF2L2Q86YR7 1114 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 NCOA7Q8NI08 942 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 MAP4K1Q92918 833 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 BADQ92934 168 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 VTI1AQ96AJ9 217 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 TRIM43Q96BQ3 446 aaPredicted RBP10.34□□□□□ -0.75
LIN52-203ENST00000554289 LRCH3Q96II8 777 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 UBA5Q9GZZ9 404 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
LIN52-203ENST00000554289 RBM47A0AV96 593 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 NKRFO15226 690 aaKnown RBP eCLIP10.33□□□□□ -0.76
LIN52-203ENST00000554289 TLR3O15455 904 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 DYNC1LI2O43237 492 aaPredicted RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 DHX16O60231 1041 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 PQBP1O60828 265 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 SMPD1P17405 629 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 PDE4DQ08499 809 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 TRAF1Q13077 416 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 SART3Q15020 963 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 FSCN1Q16658 493 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 USH1GQ495M9 461 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 DUSP28Q4G0W2 176 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 CYB5R4Q7L1T6 521 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 EEPD1Q7L9B9 569 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 SH3RF1Q7Z6J0 888 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 RALYLQ86SE5 291 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 FBXO11Q86XK2 927 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 FBXO16Q8IX29 292 aaPredicted RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 SAMD3Q8N6K7 520 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 PURBQ96QR8 312 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 JMJD4Q9H9V9 463 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 PDGFCQ9NRA1 345 aa10.33□□□□□ -0.76
LIN52-203ENST00000554289 MAP3K20Q9NYL2 800 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 MRPL11Q9Y3B7 192 aaKnown RBP10.33□□□□□ -0.76
LIN52-203ENST00000554289 PALM3A6NDB9 673 aaPredicted RBP10.32□□□□□ -0.76
LIN52-203ENST00000554289 KLRF2D3W0D1 207 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 E7EWF7 191 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 IFIT3O14879 490 aaKnown RBP10.32□□□□□ -0.76
LIN52-203ENST00000554289 EDNRBP24530 442 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 IRX5P78411 483 aaPredicted RBP10.32□□□□□ -0.76
LIN52-203ENST00000554289 BEX3Q00994 111 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 QRICH1Q2TAL8 776 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 IWS1Q96ST2 819 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 MTA3Q9BTC8 594 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 AMNQ9BXJ7 453 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 WDR11Q9BZH6 1224 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 CPVLQ9H3G5 476 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 POLR3EQ9NVU0 708 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 KIAA1217Q5T5P2 1943 aa10.32□□□□□ -0.76
LIN52-203ENST00000554289 TIMP1P01033 207 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 ITGB8P26012 769 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 CPT1AP50416 773 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 FPGSQ05932 587 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 ITGA7Q13683 1181 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 WTAPQ15007 396 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 SHHQ15465 462 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 BRDTQ58F21 947 aaPredicted RBP10.31□□□□□ -0.76
LIN52-203ENST00000554289 FAM109BQ6ICB4 259 aaPredicted RBP10.31□□□□□ -0.76
LIN52-203ENST00000554289 CXCL17Q6UXB2 119 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 CENPQQ7L2Z9 268 aaPredicted RBP10.31□□□□□ -0.76
LIN52-203ENST00000554289 FAM126BQ8IXS8 530 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 TMTC2Q8N394 836 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 STAG2Q8N3U4 1231 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 SLC43A3Q8NBI5 491 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 NSUN6Q8TEA1 469 aaKnown RBP10.31□□□□□ -0.76
LIN52-203ENST00000554289 SCFD2Q8WU76 684 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 MTMR8Q96EF0 704 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 RIOX1Q9H6W3 641 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 VAT1LQ9HCJ6 419 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 MAD2L2Q9UI95 211 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 TBX21Q9UL17 535 aa10.31□□□□□ -0.76
LIN52-203ENST00000554289 RBM8AQ9Y5S9 174 aaKnown RBP10.31□□□□□ -0.76
LIN52-203ENST00000554289 ZBTB5O15062 677 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 KPNA6O60684 536 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 CD4P01730 458 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 GHRHRQ02643 423 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 TTLL4Q14679 1199 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 GRM4Q14833 912 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 PPP2R5BQ15173 497 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 MFSD5Q6N075 450 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 DEFB123Q8N688 67 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 SYTL5Q8TDW5 730 aaPredicted RBP10.3□□□□□ -0.76
LIN52-203ENST00000554289 TBC1D5Q92609 795 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 TAAR1Q96RJ0 339 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 MAP3K14Q99558 947 aa10.3□□□□□ -0.76
LIN52-203ENST00000554289 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
LIN52-203ENST00000554289 DDX49Q9Y6V7 483 aaKnown RBP10.3□□□□□ -0.76
LIN52-203ENST00000554289 A0A0C4DFX4 3053 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 RANBP2P49792 3224 aaKnown RBP10.29□□□□□ -0.76
LIN52-203ENST00000554289 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 SMAD3P84022 425 aaKnown RBP10.29□□□□□ -0.76
LIN52-203ENST00000554289 TROAPQ12815 778 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 PPIGQ13427 754 aaKnown RBP eCLIP10.29□□□□□ -0.764e-8■■□□□ 12.8
LIN52-203ENST00000554289 STXBP2Q15833 593 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 BMP2KLQ5H9B9 411 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 TMEM67Q5HYA8 995 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 C9orf50Q5SZB4 431 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 TMEM63BQ5T3F8 832 aa10.29□□□□□ -0.76
LIN52-203ENST00000554289 CASC1Q6TDU7 716 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms