RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 GCM1Q9NP62 436 aa7.48□□□□□ -1.21
ATXN3-225ENST00000554214 CD320Q9NPF0 282 aa7.48□□□□□ -1.21
ATXN3-225ENST00000554214 TRBV23OR9-2A0A075B6M9 112 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 PPP1R11O60927 126 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-225ENST00000554214 CORO7P57737 925 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 TMEM62Q0P6H9 643 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 NR1I3Q14994 352 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 COPS5Q92905 334 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 CNTD2Q9H8S5 307 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 CLEC1BQ9P126 229 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 MBD1Q9UIS9 605 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-225ENST00000554214 CUX2O14529 1486 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 ERCC6Q03468 1493 aa7.47□□□□□ -1.21
ATXN3-225ENST00000554214 KLF4O43474 513 aa7.46□□□□□ -1.22
ATXN3-225ENST00000554214 PLS3P13797 630 aa7.46□□□□□ -1.22
ATXN3-225ENST00000554214 PAQR3Q6TCH7 311 aa7.46□□□□□ -1.22
ATXN3-225ENST00000554214 RPTNQ6XPR3 784 aa7.46□□□□□ -1.22
ATXN3-225ENST00000554214 EEPD1Q7L9B9 569 aa7.46□□□□□ -1.22
ATXN3-225ENST00000554214 LRRC56Q8IYG6 542 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-225ENST00000554214 BTN2A2Q8WVV5 523 aa7.46□□□□□ -1.22
ATXN3-225ENST00000554214 NKX2-4Q9H2Z4 354 aa7.46□□□□□ -1.22
ATXN3-225ENST00000554214 TBX1O43435 398 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 CYBBP04839 570 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 THBDP07204 575 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 HOXC12P31275 282 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 TMC6Q7Z403 805 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 ZNF227Q86WZ6 799 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 LZTR1Q8N653 840 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 ZSCAN18Q8TBC5 510 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-225ENST00000554214 GULP1Q9UBP9 304 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 RWDD3Q9Y3V2 267 aa7.45□□□□□ -1.22
ATXN3-225ENST00000554214 C7orf72A4D263 438 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 F8W031 263 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-225ENST00000554214 NPHS1O60500 1241 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 DBHP09172 617 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 LINC00310P59036 64 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 DDR2Q16832 855 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 USP33Q8TEY7 942 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 MMP19Q99542 508 aa7.44□□□□□ -1.22
ATXN3-225ENST00000554214 PPP1R1BQ9UD71 204 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-225ENST00000554214 CNOT6Q9ULM6 557 aaKnown RBP7.44□□□□□ -1.22
ATXN3-225ENST00000554214 ZC3H12DA2A288 527 aaKnown RBP7.43□□□□□ -1.22
ATXN3-225ENST00000554214 N4BP3O15049 544 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 STK10O94804 968 aaKnown RBP7.43□□□□□ -1.22
ATXN3-225ENST00000554214 SNRPB2P08579 225 aaKnown RBP7.43□□□□□ -1.22
ATXN3-225ENST00000554214 ECI1P42126 302 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 EPHB3P54753 998 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 CYP4F3Q08477 520 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 CIAPIN1Q6FI81 312 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 ZC3H14Q6PJT7 736 aaKnown RBP7.43□□□□□ -1.22
ATXN3-225ENST00000554214 C1QL4Q86Z23 238 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 MZB1Q8WU39 189 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 CCDC140Q96MF4 163 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 IRF2BPLQ9H1B7 796 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 EPN3Q9H201 632 aa7.43□□□□□ -1.22
ATXN3-225ENST00000554214 DBR1Q9UK59 544 aaKnown RBP7.43□□□□□ -1.22
ATXN3-225ENST00000554214 DCAF1Q9Y4B6 1507 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 BTBD11A6QL63 1104 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 AGRPO00253 132 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 NUAK1O60285 661 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 ATP2B1P20020 1258 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 KCNJ6P48051 423 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 CDR1P51861 262 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 PRR5P85299 388 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 RAB33AQ14088 237 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 SF1Q15637 639 aaKnown RBP7.42□□□□□ -1.22
ATXN3-225ENST00000554214 IQCEQ6IPM2 695 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 NPLOC4Q8TAT6 608 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 SIGLEC10Q96LC7 697 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 MTA3Q9BTC8 594 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 TANGO6Q9C0B7 1094 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 KCTD3Q9Y597 815 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 HCFC2Q9Y5Z7 792 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 IRAK3Q9Y616 596 aa7.42□□□□□ -1.22
ATXN3-225ENST00000554214 NESP48681 1621 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 FUCA1P04066 466 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 GLI4P10075 376 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 NCKAP1LP55160 1127 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 INF2Q27J81 1249 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 SLC10A6Q3KNW5 377 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 PLEKHN1Q494U1 663 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-225ENST00000554214 ZNF385BQ569K4 471 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 MBLAC2Q68D91 279 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 CABP7Q86V35 215 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 DPF3Q92784 378 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 TRIM55Q9BYV6 548 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 RXFP1Q9HBX9 757 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 FBLN5Q9UBX5 448 aa7.41□□□□□ -1.22
ATXN3-225ENST00000554214 ARNTLO00327 626 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 CPP00450 1065 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 SCG5P05408 212 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 ZSCAN22P10073 491 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-225ENST00000554214 SSPNQ14714 243 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
ATXN3-225ENST00000554214 CKAP2LQ8IYA6 745 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms