RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CHGBP05060 677 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 ACTN1P12814 892 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 PSMC6P62333 389 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 GRB10Q13322 594 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 PWP2Q15269 919 aaKnown RBP9.15□□□□□ -0.94
ABCD4-220ENST00000553998 DUSP28Q4G0W2 176 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 KRT40Q6A162 431 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 HERC6Q8IVU3 1022 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 STRBPQ96SI9 672 aaKnown RBP9.15□□□□□ -0.94
ABCD4-220ENST00000553998 FSD1Q9BTV5 496 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 MKNK2Q9HBH9 465 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 VTA1Q9NP79 307 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 CD320Q9NPF0 282 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 PDGFCQ9NRA1 345 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 TNKSO95271 1327 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 MYH4Q9Y623 1939 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 KIF28PB7ZC32 967 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 RNF113AO15541 343 aaKnown RBP9.14□□□□□ -0.95
ABCD4-220ENST00000553998 BAIAP3O94812 1187 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 TTLL1O95922 423 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 IQCF3P0C7M6 154 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 CYP2C9P11712 490 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 BMP3P12645 472 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 PURAQ00577 322 aaKnown RBP9.14□□□□□ -0.95
ABCD4-220ENST00000553998 TMEM63BQ5T3F8 832 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 NOL8Q76FK4 1167 aaKnown RBP9.14□□□□□ -0.95
ABCD4-220ENST00000553998 FAM160B2Q86V87 743 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 CHURC1Q8WUH1 139 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 STAG1Q8WVM7 1258 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 APPBP2Q92624 585 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 RNF146Q9NTX7 359 aa9.14□□□□□ -0.95
ABCD4-220ENST00000553998 TRMT13Q9NUP7 481 aaKnown RBP9.14□□□□□ -0.95
ABCD4-220ENST00000553998 GREB1LQ9C091 1923 aaPredicted RBP9.13□□□□□ -0.95
ABCD4-220ENST00000553998 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 TMEM232C9JQI7 657 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 HIP1O00291 1037 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 GSPT1P15170 499 aaKnown RBP9.13□□□□□ -0.95
ABCD4-220ENST00000553998 PTGS1P23219 599 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 STAT2P52630 851 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 PTPN11Q06124 597 aaPredicted RBP9.13□□□□□ -0.95
ABCD4-220ENST00000553998 BMP2KLQ5H9B9 411 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 SLFN13Q68D06 897 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 NFRKBQ6P4R8 1299 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 ALYREFQ86V81 257 aaKnown RBP9.13□□□□□ -0.95
ABCD4-220ENST00000553998 ZNF444Q8N0Y2 327 aaPredicted RBP9.13□□□□□ -0.95
ABCD4-220ENST00000553998 NEDD1Q8NHV4 660 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 ARNTL2Q8WYA1 636 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 RILPL2Q969X0 211 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 CEP95Q96GE4 821 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 GMCL1Q96IK5 515 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 TRERF1Q96PN7 1200 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 KCNH6Q9H252 994 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 CERS4Q9HA82 394 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 ZNF287Q9HBT7 754 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 CYP39A1Q9NYL5 469 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 PRRC2BQ5JSZ5 2229 aaKnown RBP9.13□□□□□ -0.95
ABCD4-220ENST00000553998 MYO9BQ13459 2157 aa9.13□□□□□ -0.95
ABCD4-220ENST00000553998 PLIN4Q96Q06 1357 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 MUC6Q6W4X9 2439 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 A6NJR5 290 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 KPNA6O60684 536 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 SDSP20132 328 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 CPT1AP50416 773 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 GPNMBQ14956 572 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 LEXMQ3ZCV2 418 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 KIAA1211Q6ZU35 1233 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 DEFB128Q7Z7B8 93 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 FBXO16Q8IX29 292 aaPredicted RBP9.12□□□□□ -0.95
ABCD4-220ENST00000553998 FAM178BQ8IXR5 827 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 MTG1Q9BT17 334 aaPredicted RBP9.12□□□□□ -0.95
ABCD4-220ENST00000553998 HOMER2Q9NSB8 354 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
ABCD4-220ENST00000553998 DDX49Q9Y6V7 483 aaKnown RBP9.12□□□□□ -0.95
ABCD4-220ENST00000553998 FAM86C2PA6NEL3 165 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 MINDY4BA8MYZ0 360 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 NKRFO15226 690 aaKnown RBP eCLIP9.11□□□□□ -0.95
ABCD4-220ENST00000553998 ALADP13716 330 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 GNAT2P19087 354 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 NOVP48745 357 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 ERVK-21P61565 698 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 BFSP2Q13515 415 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 MUM1L1Q5H9M0 696 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 ZMYM1Q5SVZ6 1142 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 RCSD1Q6JBY9 416 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 EEPD1Q7L9B9 569 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 SPRED2Q7Z698 418 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 GJD3Q8N144 294 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 RETREG2Q8NC44 543 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.11□□□□□ -0.95
ABCD4-220ENST00000553998 OSBP2Q969R2 916 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 WDR11Q9BZH6 1224 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 UBE2ZQ9H832 354 aaPredicted RBP9.11□□□□□ -0.95
ABCD4-220ENST00000553998 HELLSQ9NRZ9 838 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 DIAPH3Q9NSV4 1193 aa9.11□□□□□ -0.95
ABCD4-220ENST00000553998 POTEB3A0JP26 581 aa9.1□□□□□ -0.95
ABCD4-220ENST00000553998 PATL2C9JE40 543 aaKnown RBP9.1□□□□□ -0.95
ABCD4-220ENST00000553998 PRDM1O75626 825 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms