RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 FAM71BQ8TC56 605 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 RASGRP4Q8TDF6 673 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
ARHGEF40-202ENST00000553709 FAM170AA1A519 330 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 K7ENM7 598 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 DAPK3O43293 454 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 HSPA1LP34931 641 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 ENOX1Q8TC92 643 aaKnown RBP16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 LARSQ9P2J5 1176 aaKnown RBP16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 GINS2Q9Y248 185 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 LGSNQ5TDP6 509 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 ZNF658Q5TYW1 1059 aaPredicted RBP16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 ANKRD13CQ8N6S4 541 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 ZSWIM5Q9P217 1185 aa16.83■□□□□ 0.29
ARHGEF40-202ENST00000553709 NCOA3Q9Y6Q9 1424 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 P2RX5Q93086 422 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 SOS2Q07890 1332 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 A0A1B0GUA9 196 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 TBC1D8O95759 1140 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 FOSP01100 380 aaPredicted RBP16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 LIFRP42702 1097 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 RETREG2Q8NC44 543 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 VPS37BQ9H9H4 285 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 KIAA1024Q9UPX6 916 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 XDHP47989 1333 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 CA8P35219 290 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 ZNF131P52739 623 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 PTPROQ16827 1216 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 NIM1KQ8IY84 436 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 CCDC89Q8N998 374 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 DEPTORQ8TB45 409 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 RNF34Q969K3 372 aa16.83■□□□□ 0.28
ARHGEF40-202ENST00000553709 APBA3O96018 575 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 ASPRV1Q53RT3 343 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 PLA2G4DQ86XP0 818 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 KIAA0825Q8IV33 1275 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 LEMD3Q9Y2U8 911 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 TESPA1A2RU30 521 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 PTPN21Q16825 1174 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 PDE11AQ9HCR9 933 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 ATP8B1O43520 1251 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 PPM1FP49593 454 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 GPATCH4Q5T3I0 446 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 VSTM4Q8IW00 320 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 MCUR1Q96AQ8 359 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 TEKT3Q9BXF9 490 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 SRPRBQ9Y5M8 271 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 BUB1BO60566 1050 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 YWHAEP62258 255 aaKnown RBP16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 RASSF7Q02833 373 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 CACNA2D3Q8IZS8 1091 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 CAPS2Q9BXY5 557 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 TRIM6Q9C030 488 aaPredicted RBP16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 DPH5Q9H2P9 285 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
ARHGEF40-202ENST00000553709 GNPTABQ3T906 1256 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 GKAP1Q5VSY0 366 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 CCDC62Q6P9F0 684 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 PIGBQ92521 554 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 MYOM1P52179 1685 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 VGLL3A8MV65 326 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 ENC1O14682 589 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 PRPF3O43395 683 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 MYL1P05976 194 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 GBP1P32455 592 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 CYP4A11Q02928 519 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 XKR9Q5GH70 373 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 GJA10Q969M2 543 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 ALAS1P13196 640 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 EHHADHQ08426 723 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 DOK7Q18PE1 504 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 GRK7Q8WTQ7 553 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 RABGAP1Q9Y3P9 1069 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 BZW2Q9Y6E2 419 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 IVNS1ABPQ9Y6Y0 642 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 RNF40O75150 1001 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 PRPF6O94906 941 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 STX2P32856 288 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 PCK1P35558 622 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 ATP1A2P50993 1020 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 ANKRD42Q8N9B4 389 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 P3H4Q92791 437 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 HOMER3Q9NSC5 361 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 C1orf112Q9NSG2 853 aa16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 SAMSN1Q9NSI8 373 aaKnown RBP16.81■□□□□ 0.28
ARHGEF40-202ENST00000553709 H7C1W4 665 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 SF3A3Q12874 501 aaKnown RBP eCLIP16.8■□□□□ 0.282e-6■■■□□ 16.2
ARHGEF40-202ENST00000553709 BRDTQ58F21 947 aaPredicted RBP16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 MGARPQ8TDB4 240 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 CCDC17Q96LX7 622 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 I3L4J1 428 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 PDE6CP51160 858 aa16.8■□□□□ 0.28
ARHGEF40-202ENST00000553709 APBA1Q02410 837 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms