RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 RBM47A0AV96 593 aaKnown RBP11.51□□□□□ -0.57
CHD8-205ENST00000553651 FDX1P10109 184 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 KCNA5P22460 613 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 DEFB103AP81534 67 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 UBE3CQ15386 1083 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
CHD8-205ENST00000553651 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 NEK9Q8TD19 979 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 CEP95Q96GE4 821 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 UIMC1Q96RL1 719 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 CYP39A1Q9NYL5 469 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 ARPP21Q9UBL0 812 aaPredicted RBP11.51□□□□□ -0.57
CHD8-205ENST00000553651 SYNPO2Q9UMS6 1093 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 CTDP1Q9Y5B0 961 aaPredicted RBP11.51□□□□□ -0.57
CHD8-205ENST00000553651 TECTAO75443 2155 aa11.51□□□□□ -0.57
CHD8-205ENST00000553651 ZDBF2Q9HCK1 2354 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 LINC01553A4QN01 128 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 C19orf67A6NJJ6 358 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 GSG1L2A8MUP6 293 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 DCXO43602 365 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 ZKSCAN2Q63HK3 967 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
CHD8-205ENST00000553651 NFRKBQ6P4R8 1299 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 KIAA1211Q6ZU35 1233 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 HFE2Q6ZVN8 426 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 LRRC47Q8N1G4 583 aaKnown RBP11.5□□□□□ -0.57
CHD8-205ENST00000553651 TRERF1Q96PN7 1200 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
CHD8-205ENST00000553651 FTOQ9C0B1 505 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHD8-205ENST00000553651 MYO7AQ13402 2215 aa11.5□□□□□ -0.57
CHD8-205ENST00000553651 CACNA1HO95180 2353 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 SPTBN4Q9H254 2564 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 TMEM232C9JQI7 657 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 GJB5O95377 273 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 MYL3P08590 195 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 BMP3P12645 472 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 SSTR3P32745 418 aaPredicted RBP11.49□□□□□ -0.57
CHD8-205ENST00000553651 ZP2Q05996 745 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 SLFN13Q68D06 897 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 STK11IPQ8N1F8 1099 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 DHX38Q92620 1227 aaKnown RBP11.49□□□□□ -0.57
CHD8-205ENST00000553651 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
CHD8-205ENST00000553651 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
CHD8-205ENST00000553651 HAUS7Q99871 368 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 WDR11Q9BZH6 1224 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 BOLA2Q9H3K6 86 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 PLIN4Q96Q06 1357 aa11.49□□□□□ -0.57
CHD8-205ENST00000553651 A6NJR5 290 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 PLA2G6O60733 806 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 CXCL10P02778 98 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 ALAS1P13196 640 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 ATP5JP18859 108 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 CPT1AP50416 773 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 STAT2P52630 851 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 SNAP25P60880 206 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 PTPN11Q06124 597 aaPredicted RBP11.48□□□□□ -0.57
CHD8-205ENST00000553651 RBL2Q08999 1139 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
CHD8-205ENST00000553651 BFSP2Q13515 415 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 LRRFIP1Q32MZ4 808 aaKnown RBP11.48□□□□□ -0.57
CHD8-205ENST00000553651 FAM47CQ5HY64 1035 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 RETREG2Q8NC44 543 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 RAD9AQ99638 391 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 MKNK2Q9HBH9 465 aa11.48□□□□□ -0.57
CHD8-205ENST00000553651 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
CHD8-205ENST00000553651 ZFHX2Q9C0A1 2572 aaPredicted RBP11.47□□□□□ -0.57
CHD8-205ENST00000553651 H3BQ06 376 aaPredicted RBP11.47□□□□□ -0.57
CHD8-205ENST00000553651 NBNO60934 754 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 PRDM1O75626 825 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 TTLL1O95922 423 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 KCNJ6P48051 423 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 ALDH5A1P51649 535 aaPredicted RBP11.47□□□□□ -0.57
CHD8-205ENST00000553651 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 GIMAP6Q6P9H5 292 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 RASGRP2Q7LDG7 609 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 FAM160B2Q86V87 743 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 CLASRPQ8N2M8 674 aaKnown RBP11.47□□□□□ -0.57
CHD8-205ENST00000553651 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 COPS5Q92905 334 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 KIF1BPQ96EK5 621 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD8-205ENST00000553651 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
CHD8-205ENST00000553651 PUS10Q3MIT2 529 aaKnown RBP11.46□□□□□ -0.57
CHD8-205ENST00000553651 HSP90AB4PQ58FF6 505 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 GDF6Q6KF10 455 aaPredicted RBP11.46□□□□□ -0.57
CHD8-205ENST00000553651 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 NSMFQ6X4W1 530 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 SESTD1Q86VW0 696 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 ITPRIPQ8IWB1 547 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 SIRT2Q8IXJ6 389 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 PRSS33Q8NF86 280 aa11.46□□□□□ -0.57
CHD8-205ENST00000553651 OR6J1Q8NGC5 347 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms