RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 KLRF2D3W0D1 207 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
CCNK-202ENST00000553636 SMPD1P17405 629 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 CST5P28325 142 aaPredicted RBP13.53□□□□□ -0.24
CCNK-202ENST00000553636 BMP8BP34820 402 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 GJA9P57773 515 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 ANTXR2P58335 489 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 BEX3Q00994 111 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 GRM4Q14833 912 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 GNASQ5JWF2 1037 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 TMEM63BQ5T3F8 832 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 TLK2Q86UE8 772 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 PCSK9Q8NBP7 692 aaKnown RBP13.53□□□□□ -0.24
CCNK-202ENST00000553636 MORC4Q8TE76 937 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 PDLIM7Q9NR12 457 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
CCNK-202ENST00000553636 PALM3A6NDB9 673 aaPredicted RBP13.52□□□□□ -0.25
CCNK-202ENST00000553636 SLC27A2O14975 620 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 ASGR1P07306 291 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 PDE4DQ08499 809 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 C1orf53Q5VUE5 145 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 CREB3L3Q68CJ9 461 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 CCSAPQ6IQ19 270 aaPredicted RBP13.52□□□□□ -0.25
CCNK-202ENST00000553636 TAPT1Q6NXT6 567 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 SH3RF1Q7Z6J0 888 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 HOMER1Q86YM7 354 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 TBC1D5Q92609 795 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 GLT1D1Q96MS3 346 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 MPHOSPH6Q99547 160 aaKnown RBP13.52□□□□□ -0.25
CCNK-202ENST00000553636 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.25
CCNK-202ENST00000553636 GNEQ9Y223 722 aaKnown RBP13.52□□□□□ -0.25
CCNK-202ENST00000553636 DNAH12Q6ZR08 3092 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 LOC102724159A0A0B4J2E5 919 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 SOX1O00570 391 aaPredicted RBP13.51□□□□□ -0.25
CCNK-202ENST00000553636 CTAGE5O15320 804 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 DYNC1LI2O43237 492 aaPredicted RBP13.51□□□□□ -0.25
CCNK-202ENST00000553636 PRC1O43663 620 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 CDC45O75419 566 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 PWP2Q15269 919 aaKnown RBP13.51□□□□□ -0.25
CCNK-202ENST00000553636 FSCN1Q16658 493 aaKnown RBP13.51□□□□□ -0.25
CCNK-202ENST00000553636 IQSEC1Q6DN90 963 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 CASC1Q6TDU7 716 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 CATIPQ7Z7H3 387 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 TDHQ8IZJ6 230 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
CCNK-202ENST00000553636 GPHNQ9NQX3 736 aaPredicted RBP13.51□□□□□ -0.25
CCNK-202ENST00000553636 MRPL11Q9Y3B7 192 aaKnown RBP13.51□□□□□ -0.25
CCNK-202ENST00000553636 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
CCNK-202ENST00000553636 NEFLP07196 543 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 CLTBP09497 229 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 MCM5P33992 734 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 TROAPQ12815 778 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 COL9A3Q14050 684 aaPredicted RBP13.5□□□□□ -0.25
CCNK-202ENST00000553636 NECTIN1Q15223 517 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 CXCL17Q6UXB2 119 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 MCF2L2Q86YR7 1114 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 ZNF654Q8IZM8 581 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 DNERQ8NFT8 737 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
CCNK-202ENST00000553636 IGDCC4Q8TDY8 1250 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 MTMR8Q96EF0 704 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 PIGSQ96S52 555 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 LY9Q9HBG7 655 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 COL20A1Q9P218 1284 aa13.5□□□□□ -0.25
CCNK-202ENST00000553636 RANBP2P49792 3224 aaKnown RBP13.5□□□□□ -0.25
CCNK-202ENST00000553636 BAZ2BQ9UIF8 2168 aaKnown RBP13.49□□□□□ -0.25
CCNK-202ENST00000553636 ELP1O95163 1332 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 A0A0U1RQG5 324 aaPredicted RBP13.49□□□□□ -0.25
CCNK-202ENST00000553636 TRIM43BA6NCK2 446 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 ZBTB5O15062 677 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 CFBP00751 764 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 EDNRBP24530 442 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 NKX3-2P78367 333 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 DUSP28Q4G0W2 176 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 BADQ92934 168 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 TRIM43Q96BQ3 446 aaPredicted RBP13.49□□□□□ -0.25
CCNK-202ENST00000553636 LRCH3Q96II8 777 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 TAAR1Q96RJ0 339 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 KIAA1217Q5T5P2 1943 aa13.49□□□□□ -0.25
CCNK-202ENST00000553636 DCDC2CA8MYV0 355 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 B4DLN1 442 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 SH2B2O14492 632 aaPredicted RBP13.48□□□□□ -0.25
CCNK-202ENST00000553636 OPLAHO14841 1288 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 CYTH3O43739 400 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 RAG1P15918 1043 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 MRPL12P52815 198 aaKnown RBP13.48□□□□□ -0.25
CCNK-202ENST00000553636 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 RNF20Q5VTR2 975 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 ANKRD33Q7Z3H0 272 aa13.48□□□□□ -0.25
CCNK-202ENST00000553636 OR6J1Q8NGC5 347 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms