RNA–Protein interactions for RNA: ENST00000553463.1

LINC01588-206, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3

Gene LINC01588, Length 357 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-206ENST00000553463 SYNGAP1Q96PV0 1343 aa8.47□□□□□ -1.05
LINC01588-206ENST00000553463 NID2Q14112 1375 aa8.47□□□□□ -1.05
LINC01588-206ENST00000553463 BAZ2BQ9UIF8 2168 aaKnown RBP8.46□□□□□ -1.05
LINC01588-206ENST00000553463 PNMA6FA0A0J9YX94 578 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L15C9J2P7 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L13C9JLJ4 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L11C9JVI0 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L18D6R9N7 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L22D6RA61 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L17D6RBQ6 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L19D6RCP7 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L20D6RJB6 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 hCG_1984214I3L0E3 225 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 CXCL11O14625 94 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 HMGCRP04035 888 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 ZSCAN22P10073 491 aaPredicted RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 VCAM1P19320 739 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 CALML3P27482 149 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 GNA11P29992 359 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 KRT2P35908 639 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USP17L24Q0WX57 530 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 PLS1Q14651 629 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 SHHQ15465 462 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 CDC37Q16543 378 aaPredicted RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 PFKFB3Q16875 520 aaPredicted RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 USH1GQ495M9 461 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 KRT40Q6A162 431 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 FERMT3Q86UX7 667 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 CCAR1Q8IX12 1150 aaKnown RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 CPXCR1Q8N123 301 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 ZNF713Q8N859 430 aaPredicted RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 PRPF38AQ8NAV1 312 aaKnown RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 GPKOWQ92917 476 aaPredicted RBP eCLIP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 CUL5Q93034 780 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 AIFM3Q96NN9 605 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 AMNQ9BXJ7 453 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 FAM217BQ9NTX9 383 aaPredicted RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 PNMA3Q9UL41 463 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 PNMA2Q9UL42 364 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 PRR12Q9ULL5 1215 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 AFG3L2Q9Y4W6 797 aa8.46□□□□□ -1.06
LINC01588-206ENST00000553463 GREB1LQ9C091 1923 aaPredicted RBP8.46□□□□□ -1.06
LINC01588-206ENST00000553463 ZBTB5O15062 677 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 SNHG28P0DPA3 235 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 SNAP25P60880 206 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 NTRK3Q16288 839 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 FBXO11Q86XK2 927 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 SIAH1Q8IUQ4 282 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 BICD2Q8TD16 824 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 LBHD1Q9BQE6 289 aaPredicted RBP8.45□□□□□ -1.06
LINC01588-206ENST00000553463 ZSCAN16Q9H4T2 348 aaPredicted RBP8.45□□□□□ -1.06
LINC01588-206ENST00000553463 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 HOXC10Q9NYD6 342 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 GJD2Q9UKL4 321 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 NOL7Q9UMY1 257 aaKnown RBP8.45□□□□□ -1.06
LINC01588-206ENST00000553463 KCNJ14Q9UNX9 436 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 PCDHA1Q9Y5I3 950 aa8.45□□□□□ -1.06
LINC01588-206ENST00000553463 A0A0G2JLL6 359 aaPredicted RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 CCDC194A0A1B0GVG4 234 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 SMCO2A6NFE2 343 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 F13A1P00488 732 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 FDX1P10109 184 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 ALAS1P13196 640 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 FDPSP14324 419 aaKnown RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 ATP2B1P20020 1258 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 ADCY7P51828 1080 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 MRPL12P52815 198 aaKnown RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 SMAD3P84022 425 aaKnown RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 COG2Q14746 738 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 QRICH1Q2TAL8 776 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 TPRNQ4KMQ1 711 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 C9orf50Q5SZB4 431 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 WDR78Q5VTH9 848 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 PRRT2Q7Z6L0 340 aaPredicted RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 DIS3L2Q8IYB7 885 aaKnown RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 ANKRD13CQ8N6S4 541 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 PROCA1Q8NCQ7 364 aaPredicted RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 FBXO18Q8NFZ0 1043 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 SMCR8Q8TEV9 937 aaPredicted RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 C12orf42Q96LP6 360 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 ZNF396Q96N95 335 aaPredicted RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 GLT8D2Q9H1C3 349 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 RIOX1Q9H6W3 641 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 JMJD4Q9H9V9 463 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 CCPG1Q9ULG6 757 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 MTMR6Q9Y217 621 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 SLC45A1Q9Y2W3 748 aa8.44□□□□□ -1.06
LINC01588-206ENST00000553463 ARIH1Q9Y4X5 557 aaPredicted RBP8.44□□□□□ -1.06
LINC01588-206ENST00000553463 GOLGA6L4A6NEF3 574 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 CYTH3O43739 400 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 MARCH6O60337 910 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 MMP1P03956 469 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 PKP1Q13835 747 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 MAP3K21Q5TCX8 1036 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 LHX8Q68G74 356 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 WWC2Q6AWC2 1192 aa8.43□□□□□ -1.06
LINC01588-206ENST00000553463 GALNT17Q6IS24 598 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms