RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 MTUS1Q9ULD2 1270 aa15.43■□□□□ 0.06
VPS29-211ENST00000553128 TET1Q8NFU7 2136 aa15.43■□□□□ 0.06
VPS29-211ENST00000553128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.42■□□□□ 0.06
VPS29-211ENST00000553128 KIF28PB7ZC32 967 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 IL9P15248 144 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 ATP5JP18859 108 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 RFC2P35250 354 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 GPNMBQ14956 572 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 TCTN1Q2MV58 587 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 DUSP28Q4G0W2 176 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 HSP90AB4PQ58FF6 505 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 FAM47CQ5HY64 1035 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 ANKS1AQ92625 1134 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 ISY1Q9ULR0 285 aaKnown RBP15.42■□□□□ 0.06
VPS29-211ENST00000553128 USP34Q70CQ2 3546 aa15.42■□□□□ 0.06
VPS29-211ENST00000553128 TTLL1O95922 423 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 STAT2P52630 851 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 WDR5P61964 334 aaKnown RBP15.41■□□□□ 0.06
VPS29-211ENST00000553128 DEFB103AP81534 67 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 NHLH1Q02575 133 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 NSMFQ6X4W1 530 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 SIRT2Q8IXJ6 389 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 RPAP2Q8IXW5 612 aaPredicted RBP15.41■□□□□ 0.06
VPS29-211ENST00000553128 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 MTG1Q9BT17 334 aaPredicted RBP15.41■□□□□ 0.06
VPS29-211ENST00000553128 WDR11Q9BZH6 1224 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 SUGCTQ9HAC7 445 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 VTA1Q9NP79 307 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 POLR3EQ9NVU0 708 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 TANC1Q9C0D5 1861 aa15.41■□□□□ 0.06
VPS29-211ENST00000553128 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
VPS29-211ENST00000553128 KCNA5P22460 613 aa15.4■□□□□ 0.06
VPS29-211ENST00000553128 LEXMQ3ZCV2 418 aa15.4■□□□□ 0.06
VPS29-211ENST00000553128 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
VPS29-211ENST00000553128 RETREG2Q8NC44 543 aa15.4■□□□□ 0.06
VPS29-211ENST00000553128 PANK1Q8TE04 598 aa15.4■□□□□ 0.06
VPS29-211ENST00000553128 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
VPS29-211ENST00000553128 TRIOO75962 3097 aa15.4■□□□□ 0.06
VPS29-211ENST00000553128 MYH7P12883 1935 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 C5orf42Q9H799 3197 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 SCN10AQ9Y5Y9 1956 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 FDX1P10109 184 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 MCCP23508 829 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 SSTR3P32745 418 aaPredicted RBP15.39■□□□□ 0.05
VPS29-211ENST00000553128 IKQ13123 557 aaPredicted RBP15.39■□□□□ 0.05
VPS29-211ENST00000553128 TKFCQ3LXA3 575 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 KCTD1Q719H9 257 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 ZNF444Q8N0Y2 327 aaPredicted RBP15.39■□□□□ 0.05
VPS29-211ENST00000553128 OR6J1Q8NGC5 347 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 COPS5Q92905 334 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 OSBP2Q969R2 916 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 SNX27Q96L92 541 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 FBXL18Q96ME1 805 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 CTAGE1Q96RT6 745 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 LMCD1Q9NZU5 365 aa15.39■□□□□ 0.05
VPS29-211ENST00000553128 LINC01553A4QN01 128 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 BAIAP3O94812 1187 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 KCNJ6P48051 423 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 CPT1AP50416 773 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 ALDH5A1P51649 535 aaPredicted RBP15.38■□□□□ 0.05
VPS29-211ENST00000553128 NFRKBQ6P4R8 1299 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 FAM160B2Q86V87 743 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 CHURC1Q8WUH1 139 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 GMCL1Q96IK5 515 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 SYNPO2Q9UMS6 1093 aa15.38■□□□□ 0.05
VPS29-211ENST00000553128 PLIN4Q96Q06 1357 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 RBM47A0AV96 593 aaKnown RBP15.37■□□□□ 0.05
VPS29-211ENST00000553128 SLC1A4P43007 532 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 CHMP4BP1P59074 171 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 BAATQ14032 418 aaPredicted RBP15.37■□□□□ 0.05
VPS29-211ENST00000553128 PTCRAQ6ISU1 281 aaPredicted RBP15.37■□□□□ 0.05
VPS29-211ENST00000553128 ZSCAN25Q6NSZ9 544 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 GIMAP6Q6P9H5 292 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 NEDD1Q8NHV4 660 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 ZBED2Q9BTP6 218 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 GPHNQ9NQX3 736 aaPredicted RBP15.37■□□□□ 0.05
VPS29-211ENST00000553128 CCPG1Q9ULG6 757 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 PRR12Q9ULL5 1215 aa15.37■□□□□ 0.05
VPS29-211ENST00000553128 GRXCR2A6NFK2 248 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 NFIBO00712 420 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 TSPY3P0CV98 308 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 TSPY8P0CW00 308 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 ERVK-21P61565 698 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 BFSP2Q13515 415 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 FAM117BQ6P1L5 589 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 DHX38Q92620 1227 aaKnown RBP15.36■□□□□ 0.05
VPS29-211ENST00000553128 TGS1Q96RS0 853 aaKnown RBP15.36■□□□□ 0.05
VPS29-211ENST00000553128 PHOX2BQ99453 314 aa15.36■□□□□ 0.05
VPS29-211ENST00000553128 A6NJR5 290 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 H3BQ06 376 aaPredicted RBP15.35■□□□□ 0.05
VPS29-211ENST00000553128 M0R2C6 588 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 NBNO60934 754 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 GJB5O95377 273 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 ALADP13716 330 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 TDO2P48775 406 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 TFAP4Q01664 338 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 CSPP1Q1MSJ5 1256 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 SLC30A10Q6XR72 485 aa15.35■□□□□ 0.05
VPS29-211ENST00000553128 RAD9AQ99638 391 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms