RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 ALAS1P13196 640 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 CYBAP13498 195 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
CDK4-211ENST00000552254 KCTD2Q14681 263 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 SLC35G1Q2M3R5 365 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 TKFCQ3LXA3 575 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 Q6ZUG5 572 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDK4-211ENST00000552254 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 MAML3Q96JK9 1138 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 MMP19Q99542 508 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 TM6SF1Q9BZW5 370 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 VAT1LQ9HCJ6 419 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 HOMER2Q9NSB8 354 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 FBXO40Q9UH90 709 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 BRPF3Q9ULD4 1205 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 CCPG1Q9ULG6 757 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
CDK4-211ENST00000552254 CALM1P0DP23 149 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 CALM2P0DP24 149 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 CALM3P0DP25 149 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 TAL1P17542 331 aaPredicted RBP10.64□□□□□ -0.71
CDK4-211ENST00000552254 RXRAP19793 462 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 KIF5BP33176 963 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 ANAPC15P60006 121 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 SHHQ15465 462 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 CDC37Q16543 378 aaPredicted RBP10.64□□□□□ -0.71
CDK4-211ENST00000552254 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 GJC2Q5T442 439 aaPredicted RBP10.64□□□□□ -0.71
CDK4-211ENST00000552254 OLFML2BQ68BL8 750 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 APOA5Q6Q788 366 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 RUFY3Q7L099 469 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 RAB11FIP4Q86YS3 637 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 FBXL16Q8N461 479 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
CDK4-211ENST00000552254 PPM1EQ8WY54 764 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 MTMR8Q96EF0 704 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 IL17RAQ96F46 866 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 AGXT2Q9BYV1 514 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 RIOX1Q9H6W3 641 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 ACAD9Q9H845 621 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 ATP11BQ9Y2G3 1177 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 CYP46A1Q9Y6A2 500 aa10.64□□□□□ -0.71
CDK4-211ENST00000552254 DNAJC25-GNG10A0A024R161 153 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 CYTH3O43739 400 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 DHX16O60231 1041 aaKnown RBP10.63□□□□□ -0.71
CDK4-211ENST00000552254 SMARCA1P28370 1054 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 SMAD3P84022 425 aaKnown RBP10.63□□□□□ -0.71
CDK4-211ENST00000552254 FGD1P98174 961 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 APOBRQ0VD83 1088 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 QRICH1Q2TAL8 776 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 ZNF792Q3KQV3 632 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 SYNE3Q6ZMZ3 975 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 ANKRD35Q8N283 1001 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 FANCBQ8NB91 859 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 BRF1Q92994 677 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 DDX11Q96FC9 970 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 LZTS2Q9BRK4 669 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
CDK4-211ENST00000552254 SLC5A4Q9NY91 659 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 PNMA2Q9UL42 364 aa10.63□□□□□ -0.71
CDK4-211ENST00000552254 ZBTB5O15062 677 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 ZBTB43O43298 467 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 PLEKHA8P1O95397 391 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 GNAQP50148 359 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 RTP1P59025 263 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 TOB2Q14106 344 aaPredicted RBP10.62□□□□□ -0.71
CDK4-211ENST00000552254 USH1GQ495M9 461 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 C9orf50Q5SZB4 431 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 FBXO11Q86XK2 927 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 CMTR1Q8N1G2 835 aaKnown RBP10.62□□□□□ -0.71
CDK4-211ENST00000552254 SRBD1Q8N5C6 995 aaKnown RBP10.62□□□□□ -0.71
CDK4-211ENST00000552254 CLEC4DQ8WXI8 215 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 LENG1Q96BZ8 264 aaPredicted RBP10.62□□□□□ -0.71
CDK4-211ENST00000552254 PIGSQ96S52 555 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 SPZ1Q9BXG8 430 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 UPF3BQ9BZI7 483 aaKnown RBP10.62□□□□□ -0.71
CDK4-211ENST00000552254 A1CFQ9NQ94 594 aaKnown RBP10.62□□□□□ -0.71
CDK4-211ENST00000552254 THEGQ9P2T0 379 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 DIS3Q9Y2L1 958 aaKnown RBP10.62□□□□□ -0.71
CDK4-211ENST00000552254 CFAP54Q96N23 3096 aa10.62□□□□□ -0.71
CDK4-211ENST00000552254 PNMA6FA0A0J9YX94 578 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 NFIBO00712 420 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 SEPT4O43236 478 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 MSCO60682 206 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 PPP1R11O60927 126 aaPredicted RBP10.61□□□□□ -0.71
CDK4-211ENST00000552254 RCAN1P53805 252 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 EVCP57679 992 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 CNTN2Q02246 1040 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 TMTC3Q6ZXV5 915 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 FAM133AQ8N9E0 248 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 ADAMTS19Q8TE59 1207 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 FERMT2Q96AC1 680 aa10.61□□□□□ -0.71
CDK4-211ENST00000552254 RNPC3Q96LT9 517 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms