RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 GPNMBQ14956 572 aa12.91□□□□□ -0.34
TROAP-210ENST00000549534 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
TROAP-210ENST00000549534 CERKLQ49MI3 558 aaPredicted RBP12.91□□□□□ -0.34
TROAP-210ENST00000549534 CCDC102BQ68D86 513 aa12.91□□□□□ -0.34
TROAP-210ENST00000549534 NFRKBQ6P4R8 1299 aa12.91□□□□□ -0.34
TROAP-210ENST00000549534 MAPKAPK5Q8IW41 473 aa12.91□□□□□ -0.34
TROAP-210ENST00000549534 RTP3Q9BQQ7 232 aa12.91□□□□□ -0.34
TROAP-210ENST00000549534 C11orf84Q9BUA3 381 aaPredicted RBP12.91□□□□□ -0.34
TROAP-210ENST00000549534 AMHP03971 560 aa12.9□□□□□ -0.34
TROAP-210ENST00000549534 SHC2P98077 582 aa12.9□□□□□ -0.34
TROAP-210ENST00000549534 EFHBQ8N7U6 833 aa12.9□□□□□ -0.34
TROAP-210ENST00000549534 TGFBRAP1Q8WUH2 860 aa12.9□□□□□ -0.34
TROAP-210ENST00000549534 SUSD6Q92537 303 aa12.9□□□□□ -0.34
TROAP-210ENST00000549534 EHD4Q9H223 541 aa12.9□□□□□ -0.34
TROAP-210ENST00000549534 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.34
TROAP-210ENST00000549534 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
TROAP-210ENST00000549534 R4GN57 208 aa12.9□□□□□ -0.34
TROAP-210ENST00000549534 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.89□□□□□ -0.35
TROAP-210ENST00000549534 SELPP16109 830 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
TROAP-210ENST00000549534 PPP4CP60510 307 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 PPM1JQ5JR12 505 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
TROAP-210ENST00000549534 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 LRRC8DQ7L1W4 858 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 SERPINB13Q9UIV8 391 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 NOD1Q9Y239 953 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 RWDD3Q9Y3V2 267 aa12.89□□□□□ -0.35
TROAP-210ENST00000549534 GCN1Q92616 2671 aaKnown RBP12.88□□□□□ -0.35
TROAP-210ENST00000549534 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
TROAP-210ENST00000549534 BRD1O95696 1058 aa12.88□□□□□ -0.35
TROAP-210ENST00000549534 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
TROAP-210ENST00000549534 FAM47CQ5HY64 1035 aa12.88□□□□□ -0.35
TROAP-210ENST00000549534 IQSEC1Q6DN90 963 aa12.88□□□□□ -0.35
TROAP-210ENST00000549534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
TROAP-210ENST00000549534 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
TROAP-210ENST00000549534 YME1L1Q96TA2 773 aa12.88□□□□□ -0.35
TROAP-210ENST00000549534 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
TROAP-210ENST00000549534 F6X3S4 739 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 VWA5AO00534 786 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
TROAP-210ENST00000549534 ZIC2O95409 532 aaPredicted RBP12.87□□□□□ -0.35
TROAP-210ENST00000549534 GUCY1A2P33402 732 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 PURAQ00577 322 aaKnown RBP12.87□□□□□ -0.35
TROAP-210ENST00000549534 RBL2Q08999 1139 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 ANKRD44Q8N8A2 993 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 SUMF1Q8NBK3 374 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 FLCNQ8NFG4 579 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
TROAP-210ENST00000549534 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
TROAP-210ENST00000549534 SPEGQ15772 3267 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 GRM6O15303 877 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 NBNO60934 754 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 MMP1P03956 469 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 CRIPAKQ8N1N5 446 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
TROAP-210ENST00000549534 FGD4Q96M96 766 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
TROAP-210ENST00000549534 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
TROAP-210ENST00000549534 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 NCDNQ9UBB6 729 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 NR2E1Q9Y466 385 aa12.86□□□□□ -0.35
TROAP-210ENST00000549534 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
TROAP-210ENST00000549534 PMLP29590 882 aa12.85□□□□□ -0.35
TROAP-210ENST00000549534 SEPT2Q15019 361 aa12.85□□□□□ -0.35
TROAP-210ENST00000549534 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
TROAP-210ENST00000549534 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.85□□□□□ -0.35
TROAP-210ENST00000549534 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
TROAP-210ENST00000549534 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
TROAP-210ENST00000549534 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
TROAP-210ENST00000549534 ZMIZ1Q9ULJ6 1067 aa12.85□□□□□ -0.35
TROAP-210ENST00000549534 MYO7AQ13402 2215 aa12.85□□□□□ -0.35
TROAP-210ENST00000549534 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 PI15O43692 258 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 CIAO1O76071 339 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 CTNNB1P35222 781 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 BMPR1AP36894 532 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 CPT1AP50416 773 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 ZNF200P98182 395 aaPredicted RBP12.84□□□□□ -0.35
TROAP-210ENST00000549534 TCTN1Q2MV58 587 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 KIAA1755Q5JYT7 1200 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 TTC6Q86TZ1 520 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 ADAMTS8Q9UP79 889 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 NAV2Q8IVL1 2488 aa12.84□□□□□ -0.35
TROAP-210ENST00000549534 ASB14A6NK59 587 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 KPNA6O60684 536 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
TROAP-210ENST00000549534 PTGISQ16647 500 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 LURAP1LQ8IV03 231 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 ANKRD35Q8N283 1001 aa12.83□□□□□ -0.36
TROAP-210ENST00000549534 KDF1Q8NAX2 398 aaPredicted RBP12.83□□□□□ -0.36
TROAP-210ENST00000549534 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
TROAP-210ENST00000549534 TOP1MTQ969P6 601 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms