RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 PRMT2P55345 433 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 FCGRTP55899 365 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 NUCB2P80303 420 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 HTRA3P83110 453 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 SP3Q02447 781 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 SLC35G1Q2M3R5 365 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 REXO1Q8N1G1 1221 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 ANKRD35Q8N283 1001 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 DNERQ8NFT8 737 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 FBXO18Q8NFZ0 1043 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 AGBL1Q96MI9 1066 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 MMP19Q99542 508 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 PHF20Q9BVI0 1012 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 ADD3Q9UEY8 706 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 PCDHA4Q9UN74 947 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
SMARCD1-206ENST00000549274 CASP8AP2Q9UKL3 1982 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 ZNFX1Q9P2E3 1918 aaKnown RBP11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 SLC15A5A6NIM6 579 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 TRPA1O75762 1119 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 CNMDO75829 334 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 MMP1P03956 469 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 ERCC3P19447 782 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 WDR78Q5VTH9 848 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 RNF207Q6ZRF8 634 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 BRAPQ7Z569 592 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 PLEKHH3Q7Z736 793 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 BLIDQ8IZY5 108 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 ZSCAN16Q9H4T2 348 aaPredicted RBP11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 HOMER2Q9NSB8 354 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 CPA4Q9UI42 421 aa11.19□□□□□ -0.62
SMARCD1-206ENST00000549274 CCDC194A0A1B0GVG4 234 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 STX6O43752 255 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 FKTNO75072 461 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 CFBP00751 764 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 SLC4A3P48751 1232 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 HSD17B4P51659 736 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 SNAP25P60880 206 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 LACTBP83111 547 aaPredicted RBP11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 KRT40Q6A162 431 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 XRRA1Q6P2D8 792 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 MSL3Q8N5Y2 521 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 DNAJC5GQ8N7S2 189 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 JMYQ8N9B5 988 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 TXNRD2Q9NNW7 524 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 NOL7Q9UMY1 257 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 DIS3Q9Y2L1 958 aaKnown RBP11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
SMARCD1-206ENST00000549274 VPS37CA5D8V6 355 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 GPR25O00155 361 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 TNPO2O14787 897 aaKnown RBP11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 STAM2O75886 525 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 SYT1P21579 422 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 PTPREP23469 700 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 TRAPPC10P48553 1259 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 ORC2Q13416 577 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 GRB14Q14449 540 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 NSMFQ6X4W1 530 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 GPR142Q7Z601 462 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 DIS3L2Q8IYB7 885 aaKnown RBP11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 CLEC4DQ8WXI8 215 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 IWS1Q96ST2 819 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 A1CFQ9NQ94 594 aaKnown RBP11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 CYP39A1Q9NYL5 469 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
SMARCD1-206ENST00000549274 ASB14A6NK59 587 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 NFIBO00712 420 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 TBC1D8O95759 1140 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 GCFC2P16383 781 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 U2AF2P26368 475 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 RGS2P41220 211 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 RPS6P62753 249 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 IRF5Q13568 498 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 NONOQ15233 471 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 Q3C1V9 767 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 ATL3Q6DD88 541 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 MCTP1Q6DN14 999 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 DPP9Q86TI2 863 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 PORCNQ9H237 461 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 RIPK3Q9Y572 518 aa11.16□□□□□ -0.62
SMARCD1-206ENST00000549274 MEIS2O14770 477 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 BMP15O95972 392 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 HOXC6P09630 235 aa11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 ZSCAN22P10073 491 aaPredicted RBP11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 XRCC5P13010 732 aaKnown RBP11.15□□□□□ -0.62
SMARCD1-206ENST00000549274 ADORA2AP29274 412 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms