RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 CHMP4CQ96CF2 233 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 SEMA6BQ9H3T3 888 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 RNF216Q9NWF9 866 aaPredicted RBP11.26□□□□□ -0.61
GCN1-205ENST00000548821 MSRAQ9UJ68 235 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 TBX21Q9UL17 535 aa11.26□□□□□ -0.61
GCN1-205ENST00000548821 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
GCN1-205ENST00000548821 RANBP2P49792 3224 aaKnown RBP11.25□□□□□ -0.61
GCN1-205ENST00000548821 FOXP2O15409 715 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 KDM4AO75164 1064 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 FGBP02675 491 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 ACTN1P12814 892 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 SMPD1P17405 629 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 STXBP2Q15833 593 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 MUM1L1Q5H9M0 696 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 IFIT1BQ5T764 474 aaKnown RBP11.25□□□□□ -0.61
GCN1-205ENST00000548821 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 KCNV1Q6PIU1 500 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 CXCL17Q6UXB2 119 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 EEPD1Q7L9B9 569 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
GCN1-205ENST00000548821 FAM126BQ8IXS8 530 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 SLC43A3Q8NBI5 491 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 SYMPKQ92797 1274 aaKnown RBP11.25□□□□□ -0.61
GCN1-205ENST00000548821 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
GCN1-205ENST00000548821 KATNBL1Q9H079 304 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
GCN1-205ENST00000548821 ZNFX1Q9P2E3 1918 aaKnown RBP11.25□□□□□ -0.61
GCN1-205ENST00000548821 RBM47A0AV96 593 aaKnown RBP11.24□□□□□ -0.61
GCN1-205ENST00000548821 PARNO95453 639 aaKnown RBP11.24□□□□□ -0.61
GCN1-205ENST00000548821 CD4P01730 458 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 RFC2P35250 354 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 SNAP25P60880 206 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 RPS6P62753 249 aaKnown RBP11.24□□□□□ -0.61
GCN1-205ENST00000548821 BEX3Q00994 111 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 C9orf50Q5SZB4 431 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 TTBK2Q6IQ55 1244 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
GCN1-205ENST00000548821 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 FBXO16Q8IX29 292 aaPredicted RBP11.24□□□□□ -0.61
GCN1-205ENST00000548821 OR6J1Q8NGC5 347 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 LENG1Q96BZ8 264 aaPredicted RBP11.24□□□□□ -0.61
GCN1-205ENST00000548821 FGD4Q96M96 766 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 GAS2L1Q99501 681 aaPredicted RBP11.24□□□□□ -0.61
GCN1-205ENST00000548821 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 IL23AQ9NPF7 189 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 NOD1Q9Y239 953 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 ALPK3Q96L96 1907 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 MYH4Q9Y623 1939 aa11.24□□□□□ -0.61
GCN1-205ENST00000548821 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
GCN1-205ENST00000548821 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 FRMPD3Q5JV73 1810 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
GCN1-205ENST00000548821 EIF3JO75822 258 aaKnown RBP11.23□□□□□ -0.61
GCN1-205ENST00000548821 MYL3P08590 195 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 TXNP10599 105 aaKnown RBP11.23□□□□□ -0.61
GCN1-205ENST00000548821 FOSL2P15408 326 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
GCN1-205ENST00000548821 BFSP2Q13515 415 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 TIFAQ96CG3 184 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 FAM161BQ96MY7 647 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
GCN1-205ENST00000548821 TSPYL2Q9H2G4 693 aaPredicted RBP11.23□□□□□ -0.61
GCN1-205ENST00000548821 ZSWIM5Q9P217 1185 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 PLXNA1Q9UIW2 1896 aa11.23□□□□□ -0.61
GCN1-205ENST00000548821 MYADML2A6NDP7 307 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 A6NJR5 290 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 NFIBO00712 420 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 TNKSO95271 1327 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 IGHDP01880 384 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 CSF2RAP15509 400 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 CDC37Q16543 378 aaPredicted RBP11.22□□□□□ -0.61
GCN1-205ENST00000548821 USH1GQ495M9 461 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 TBC1D10CQ8IV04 446 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
GCN1-205ENST00000548821 ADGRF4Q8IZF3 695 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 TMTC2Q8N394 836 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 EXOC6Q8TAG9 804 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 CLEC4DQ8WXI8 215 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 HERVK_113Q902F9 699 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 ZKSCAN3Q9BRR0 538 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 KATNAL1Q9BW62 490 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 PPP1R12CQ9BZL4 782 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 ALDH8A1Q9H2A2 487 aaPredicted RBP11.22□□□□□ -0.61
GCN1-205ENST00000548821 SLC28A3Q9HAS3 691 aa11.22□□□□□ -0.61
GCN1-205ENST00000548821 B4E1Z4 1266 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 KIF28PB7ZC32 967 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 CTAGE5O15320 804 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 GH1P01241 217 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 TGFB3P10600 412 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 EDNRBP24530 442 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 DNAJB2P25686 324 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 ITGB8P26012 769 aa11.21□□□□□ -0.61
GCN1-205ENST00000548821 PURAQ00577 322 aaKnown RBP11.21□□□□□ -0.61
GCN1-205ENST00000548821 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms