RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 NAP1L2Q9ULW6 460 aaPredicted RBP10.12□□□□□ -0.79
SP1-203ENST00000548560 RPTORQ8N122 1335 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 LRRC37A2A6NM11 1700 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 PALM3A6NDB9 673 aaPredicted RBP10.11□□□□□ -0.79
SP1-203ENST00000548560 COBLO75128 1261 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 PGK2P07205 417 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 GNAQP50148 359 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 TROAPQ12815 778 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 TRAF1Q13077 416 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 MTFR1Q15390 333 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 USH1GQ495M9 461 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 OLFML2BQ68BL8 750 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 NSMFQ6X4W1 530 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 SGMS1Q86VZ5 419 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 MICU3Q86XE3 530 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 HOMER1Q86YM7 354 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 NPLOC4Q8TAT6 608 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 MAML3Q96JK9 1138 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 TCEANC2Q96MN5 208 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 MYL10Q9BUA6 226 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 UNC93B1Q9H1C4 597 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 VAT1LQ9HCJ6 419 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
SP1-203ENST00000548560 DIS3Q9Y2L1 958 aaKnown RBP10.11□□□□□ -0.79
SP1-203ENST00000548560 ABCB11O95342 1321 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 PTPDC1A2A3K4 754 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 ZBTB43O43298 467 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 EVI5O60447 810 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 RPS6KB1P23443 525 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 EXOSC10Q01780 885 aaKnown RBP10.1□□□□□ -0.79
SP1-203ENST00000548560 TRIM32Q13049 653 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 AMHR2Q16671 573 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 QRICH1Q2TAL8 776 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 APOA5Q6Q788 366 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 FBXO11Q86XK2 927 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 CCDC144CPQ8IYA2 1237 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 SLC39A7Q92504 469 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 LZTS2Q9BRK4 669 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 AMNQ9BXJ7 453 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 FAM117AQ9C073 453 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.1□□□□□ -0.79
SP1-203ENST00000548560 JMJD4Q9H9V9 463 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 A1CFQ9NQ94 594 aaKnown RBP10.1□□□□□ -0.79
SP1-203ENST00000548560 RBM28Q9NW13 759 aaKnown RBP10.1□□□□□ -0.79
SP1-203ENST00000548560 FLRT1Q9NZU1 646 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 SEC63Q9UGP8 760 aaKnown RBP10.1□□□□□ -0.79
SP1-203ENST00000548560 CYP46A1Q9Y6A2 500 aa10.1□□□□□ -0.79
SP1-203ENST00000548560 KLF18A0A0U1RQI7 1052 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 POTEFA5A3E0 1075 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 GOLGA8AA7E2F4 631 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 GOLGA8BA8MQT2 603 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 ZBTB5O15062 677 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 GJB1P08034 283 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 C7P10643 843 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 CPA1P15085 419 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 TAL1P17542 331 aaPredicted RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 RXRAP19793 462 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 CNGA1P29973 690 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 CYP2C19P33261 490 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 CACNB2Q08289 660 aaPredicted RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 RTN1Q16799 776 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 ZNF792Q3KQV3 632 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 MUM1L1Q5H9M0 696 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 Q6ZUG5 572 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 RUFY3Q7L099 469 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 RAB11FIP4Q86YS3 637 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 MSL3Q8N5Y2 521 aaKnown RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 RRP36Q96EU6 259 aaKnown RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 DEFB118Q96PH6 123 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 MPHOSPH6Q99547 160 aaKnown RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 SPZ1Q9BXG8 430 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 PAK6Q9NQU5 681 aaPredicted RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 CNPY2Q9Y2B0 182 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 MRPL11Q9Y3B7 192 aaKnown RBP10.09□□□□□ -0.79
SP1-203ENST00000548560 KIAA1217Q5T5P2 1943 aa10.09□□□□□ -0.79
SP1-203ENST00000548560 SYNGAP1Q96PV0 1343 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 DNAJC25-GNG10A0A024R161 153 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 ASB14A6NK59 587 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 NFIBO00712 420 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 MSCO60682 206 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 CAPN2P17655 700 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 SMARCA1P28370 1054 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 GJA8P48165 433 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 METAP2P50579 478 aaKnown RBP eCLIP10.08□□□□□ -0.8
SP1-203ENST00000548560 RCAN1P53805 252 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 ANAPC15P60006 121 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 MAP3K21Q5TCX8 1036 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 PRPF38BQ5VTL8 546 aaKnown RBP10.08□□□□□ -0.8
SP1-203ENST00000548560 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 MCF2L2Q86YR7 1114 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 FANCBQ8NB91 859 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 U2AF1L4Q8WU68 220 aaKnown RBP10.08□□□□□ -0.8
SP1-203ENST00000548560 PIBF1Q8WXW3 757 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 BRF1Q92994 677 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 PIGSQ96S52 555 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 TINF2Q9BSI4 451 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 TM6SF1Q9BZW5 370 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 MAF1Q9H063 256 aa10.08□□□□□ -0.8
SP1-203ENST00000548560 RIOX1Q9H6W3 641 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms