RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 ADGRF4Q8IZF3 695 aa11.09□□□□□ -0.63
USP15-208ENST00000548524 FGD4Q96M96 766 aa11.09□□□□□ -0.63
USP15-208ENST00000548524 ABHD16BQ9H3Z7 469 aa11.09□□□□□ -0.63
USP15-208ENST00000548524 TAF6LQ9Y6J9 622 aa11.09□□□□□ -0.63
USP15-208ENST00000548524 MYH4Q9Y623 1939 aa11.09□□□□□ -0.63
USP15-208ENST00000548524 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
USP15-208ENST00000548524 SOWAHBA6NEL2 793 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 NFIBO00712 420 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 SLC27A2O14975 620 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 PGK1P00558 417 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 CENPBP07199 599 aaPredicted RBP11.08□□□□□ -0.64
USP15-208ENST00000548524 CALML3P27482 149 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 LRRC26Q2I0M4 334 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 CREB3L3Q68CJ9 461 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 NOL8Q76FK4 1167 aaKnown RBP11.08□□□□□ -0.64
USP15-208ENST00000548524 CATIPQ7Z7H3 387 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 SPC25Q9HBM1 224 aa11.08□□□□□ -0.64
USP15-208ENST00000548524 ADD3Q9UEY8 706 aaKnown RBP11.08□□□□□ -0.64
USP15-208ENST00000548524 ZMYND8Q9ULU4 1186 aaPredicted RBP11.08□□□□□ -0.64
USP15-208ENST00000548524 KLRF2D3W0D1 207 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 ADCYAP1R1P41586 468 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 RNF20Q5VTR2 975 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 SLC30A10Q6XR72 485 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 RNF207Q6ZRF8 634 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 MB21D2Q8IYB1 491 aaPredicted RBP11.07□□□□□ -0.64
USP15-208ENST00000548524 STAG2Q8N3U4 1231 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 FERMT2Q96AC1 680 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 LENG1Q96BZ8 264 aaPredicted RBP11.07□□□□□ -0.64
USP15-208ENST00000548524 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
USP15-208ENST00000548524 PARP14Q460N5 1801 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 ABCB11O95342 1321 aa11.07□□□□□ -0.64
USP15-208ENST00000548524 PRC1O43663 620 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 DUSP11O75319 330 aaKnown RBP11.06□□□□□ -0.64
USP15-208ENST00000548524 SYN1P17600 705 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 MCM5P33992 734 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 ANTXR2P58335 489 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
USP15-208ENST00000548524 GRM4Q14833 912 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 NECTIN1Q15223 517 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 QRICH1Q2TAL8 776 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 CCDC144BQ3MJ40 725 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 HABP4Q5JVS0 413 aaKnown RBP11.06□□□□□ -0.64
USP15-208ENST00000548524 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 FBXO11Q86XK2 927 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 MPHOSPH6Q99547 160 aaKnown RBP11.06□□□□□ -0.64
USP15-208ENST00000548524 JMJD4Q9H9V9 463 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 MAD2L2Q9UI95 211 aa11.06□□□□□ -0.64
USP15-208ENST00000548524 MRPL11Q9Y3B7 192 aaKnown RBP11.06□□□□□ -0.64
USP15-208ENST00000548524 COL11A1P12107 1806 aaPredicted RBP11.06□□□□□ -0.64
USP15-208ENST00000548524 PALM3A6NDB9 673 aaPredicted RBP11.05□□□□□ -0.64
USP15-208ENST00000548524 CCDC69A6NI79 296 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 B4DLN1 442 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 C6orf222P0C671 652 aaPredicted RBP11.05□□□□□ -0.64
USP15-208ENST00000548524 HOXB3P14651 431 aaPredicted RBP11.05□□□□□ -0.64
USP15-208ENST00000548524 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
USP15-208ENST00000548524 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
USP15-208ENST00000548524 RTP1P59025 263 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 TNFAIP2Q03169 654 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 SLC39A5Q6ZMH5 540 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 HOMER1Q86YM7 354 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 MCF2L2Q86YR7 1114 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 FBXO16Q8IX29 292 aaPredicted RBP11.05□□□□□ -0.64
USP15-208ENST00000548524 TMTC2Q8N394 836 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 TMEM87BQ96K49 555 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 MTA3Q9BTC8 594 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 AMNQ9BXJ7 453 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 KATNBL1Q9H079 304 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 VTA1Q9NP79 307 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 ATP11BQ9Y2G3 1177 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
USP15-208ENST00000548524 ASTN1O14525 1302 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 LAMA4Q16363 1823 aa11.05□□□□□ -0.64
USP15-208ENST00000548524 LOC102724159A0A0B4J2E5 919 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 DPYSL4O14531 572 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 ZBTB5O15062 677 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 ADAMTS4O75173 837 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 KIF5BP33176 963 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 PDE4DQ08499 809 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 TROAPQ12815 778 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 TRAF1Q13077 416 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 PWP2Q15269 919 aaKnown RBP11.04□□□□□ -0.64
USP15-208ENST00000548524 KCNA10Q16322 511 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 IQSEC1Q6DN90 963 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 ZNF654Q8IZM8 581 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 DNERQ8NFT8 737 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
USP15-208ENST00000548524 VTI1AQ96AJ9 217 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 TSEN34Q9BSV6 310 aaKnown RBP11.04□□□□□ -0.64
USP15-208ENST00000548524 AP5M1Q9H0R1 490 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 PPP4R2Q9NY27 417 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 PRKAG2Q9UGJ0 569 aa11.04□□□□□ -0.64
USP15-208ENST00000548524 PHF24Q9UPV7 400 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms