RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 WNT8AQ9H1J5 351 aa14.13□□□□□ -0.15
TRAFD1-205ENST00000548277 CERS4Q9HA82 394 aa14.13□□□□□ -0.15
TRAFD1-205ENST00000548277 TRMT13Q9NUP7 481 aaKnown RBP14.13□□□□□ -0.15
TRAFD1-205ENST00000548277 RAPGEFL1Q9UHV5 662 aa14.13□□□□□ -0.15
TRAFD1-205ENST00000548277 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRAFD1-205ENST00000548277 SLC4A7Q9Y6M7 1214 aa14.13□□□□□ -0.15
TRAFD1-205ENST00000548277 RFXAPO00287 272 aa14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 NFIBO00712 420 aa14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 FOXP2O15409 715 aa14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 MX1P20591 662 aa14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 FAM47CQ5HY64 1035 aa14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 RPUSD2Q8IZ73 545 aaKnown RBP14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 VTA1Q9NP79 307 aa14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 THEGQ9P2T0 379 aa14.12□□□□□ -0.15
TRAFD1-205ENST00000548277 PLA2G6O60733 806 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 ICAM1P05362 532 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 COL9A1P20849 921 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 ALDH5A1P51649 535 aaPredicted RBP14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 TTLL4Q14679 1199 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 AKNAD1Q5T1N1 836 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 ANKRD45Q5TZF3 282 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 SYDE2Q5VT97 1194 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 PPP2R2DQ66LE6 453 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 OR6J1Q8NGC5 347 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 ATXN2LQ8WWM7 1075 aaKnown RBP14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 COPS5Q92905 334 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 ASB2Q96Q27 587 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 ALDH8A1Q9H2A2 487 aaPredicted RBP14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 Q9Y3F1 56 aa14.11□□□□□ -0.15
TRAFD1-205ENST00000548277 PRRC2BQ5JSZ5 2229 aaKnown RBP14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 RBAK-RBAKDNI3L0D1 243 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 HAND2P61296 217 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 MRPS5P82675 430 aaKnown RBP14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 SKIV2LQ15477 1246 aaKnown RBP14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 DUSP28Q4G0W2 176 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 SLC30A10Q6XR72 485 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 IL27Q8NEV9 243 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 ADAMTS19Q8TE59 1207 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 DCAF4Q8WV16 495 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 TMEM47Q9BQJ4 181 aa14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 RANBP17Q9H2T7 1088 aaKnown RBP14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 ADD3Q9UEY8 706 aaKnown RBP14.1□□□□□ -0.15
TRAFD1-205ENST00000548277 SCN10AQ9Y5Y9 1956 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 ATP2A2P16615 1042 aaKnown RBP14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 PURAQ00577 322 aaKnown RBP14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 NBPF20Q3BBV1 942 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 RNF207Q6ZRF8 634 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 VWCEQ96DN2 955 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 FAM227BQ96M60 508 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 NECAB3Q96P71 396 aaPredicted RBP14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 POLR3EQ9NVU0 708 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 PTPRSQ13332 1948 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 KIAA1217Q5T5P2 1943 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 TNKSO95271 1327 aa14.09□□□□□ -0.15
TRAFD1-205ENST00000548277 FGAP02671 866 aa14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 TFF2Q03403 129 aa14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 PDE4DQ08499 809 aa14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 USH1GQ495M9 461 aa14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 KRT40Q6A162 431 aa14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 MORC4Q8TE76 937 aa14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 UHRF1Q96T88 793 aaPredicted RBP14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 CPVLQ9H3G5 476 aa14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 SPTBN5Q9NRC6 3674 aaKnown RBP14.08□□□□□ -0.16
TRAFD1-205ENST00000548277 ORC4O43929 436 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 CA3P07451 260 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 SUPT20HL2P0C7V6 817 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 GOLGA8HP0CJ92 632 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 CPT1AP50416 773 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 RPS6P62753 249 aaKnown RBP14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 TMEM67Q5HYA8 995 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 RETREG2Q8NC44 543 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 CLEC4DQ8WXI8 215 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 EVI5LQ96CN4 794 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 ZKSCAN3Q9BRR0 538 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 UBA5Q9GZZ9 404 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
TRAFD1-205ENST00000548277 A0A0D9SFI3 127 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 TXNP10599 105 aaKnown RBP14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 PDHBP11177 359 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 PPP2R5BQ15173 497 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 MCMDC2Q4G0Z9 681 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 BTNL9Q6UXG8 535 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 TBC1D5Q92609 795 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 HELLSQ9NRZ9 838 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
TRAFD1-205ENST00000548277 RBM47A0AV96 593 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 HSPD1P10809 573 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 ACTN1P12814 892 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 NOVP48745 357 aa14.05□□□□□ -0.16
TRAFD1-205ENST00000548277 KCNQ1P51787 676 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms