RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 BFSP2Q13515 415 aa18.81■□□□□ 0.6
SVOP-202ENST00000548229 EEPD1Q7L9B9 569 aa18.81■□□□□ 0.6
SVOP-202ENST00000548229 FBXO16Q8IX29 292 aaPredicted RBP18.81■□□□□ 0.6
SVOP-202ENST00000548229 NEDD1Q8NHV4 660 aa18.81■□□□□ 0.6
SVOP-202ENST00000548229 MORC4Q8TE76 937 aa18.81■□□□□ 0.6
SVOP-202ENST00000548229 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
SVOP-202ENST00000548229 FTOQ9C0B1 505 aaKnown RBP eCLIP18.81■□□□□ 0.6
SVOP-202ENST00000548229 CYP39A1Q9NYL5 469 aa18.81■□□□□ 0.6
SVOP-202ENST00000548229 RAD50Q92878 1312 aa18.8■□□□□ 0.6
SVOP-202ENST00000548229 PI4K2BG5E9Z4 385 aa18.8■□□□□ 0.6
SVOP-202ENST00000548229 PURAQ00577 322 aaKnown RBP18.8■□□□□ 0.6
SVOP-202ENST00000548229 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
SVOP-202ENST00000548229 NFRKBQ6P4R8 1299 aa18.8■□□□□ 0.6
SVOP-202ENST00000548229 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
SVOP-202ENST00000548229 PLIN4Q96Q06 1357 aa18.8■□□□□ 0.6
SVOP-202ENST00000548229 EPOPA6NHQ4 379 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 APPP05067 770 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 IQCF3P0C7M6 154 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 KCNJ6P48051 423 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 GRB10Q13322 594 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 LRRFIP1Q32MZ4 808 aaKnown RBP18.79■□□□□ 0.6
SVOP-202ENST00000548229 FAM47CQ5HY64 1035 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 APPBP2Q92624 585 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 WDR11Q9BZH6 1224 aa18.79■□□□□ 0.6
SVOP-202ENST00000548229 LRRC37A2A6NM11 1700 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 NKRFO15226 690 aaKnown RBP eCLIP18.78■□□□□ 0.6
SVOP-202ENST00000548229 PRDM1O75626 825 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 ZFYP08048 801 aaPredicted RBP18.78■□□□□ 0.6
SVOP-202ENST00000548229 MYL3P08590 195 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 KRT40Q6A162 431 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 NSMFQ6X4W1 530 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 PANK1Q8TE04 598 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
SVOP-202ENST00000548229 NACAP1Q9BZK3 213 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 NOD1Q9Y239 953 aa18.78■□□□□ 0.6
SVOP-202ENST00000548229 BRWD1Q9NSI6 2320 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 PRR33A8MZF0 331 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 MCCP23508 829 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 NBPF20Q3BBV1 942 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 RCSD1Q6JBY9 416 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 CCDC155Q8N6L0 562 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 C11orf16Q9NQ32 467 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 CCPG1Q9ULG6 757 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 DDX19BQ9UMR2 479 aa18.77■□□□□ 0.6
SVOP-202ENST00000548229 RBM47A0AV96 593 aaKnown RBP18.76■□□□□ 0.59
SVOP-202ENST00000548229 PATL2C9JE40 543 aaKnown RBP18.76■□□□□ 0.59
SVOP-202ENST00000548229 GPAA1O43292 621 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 PARNO95453 639 aaKnown RBP18.76■□□□□ 0.59
SVOP-202ENST00000548229 PTGS1P23219 599 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 TFAP4Q01664 338 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 MUM1L1Q5H9M0 696 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 SIRT2Q8IXJ6 389 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 OR6J1Q8NGC5 347 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 ZBED2Q9BTP6 218 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
SVOP-202ENST00000548229 RNF113AO15541 343 aaKnown RBP18.75■□□□□ 0.59
SVOP-202ENST00000548229 LPXNO60711 386 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 ICAM1P05362 532 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 TMEM63BQ5T3F8 832 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 CAGE1Q8TC20 777 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 PNMA2Q9UL42 364 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 PRR12Q9ULL5 1215 aa18.75■□□□□ 0.59
SVOP-202ENST00000548229 FAM86C2PA6NEL3 165 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 B4DLN1 442 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 ALADP13716 330 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 ALDH5A1P51649 535 aaPredicted RBP18.74■□□□□ 0.59
SVOP-202ENST00000548229 MRPL12P52815 198 aaKnown RBP18.74■□□□□ 0.59
SVOP-202ENST00000548229 PPP2R5BQ15173 497 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 KCTD1Q719H9 257 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 AFAP1L1Q8TED9 768 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 SCFD2Q8WU76 684 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 GPATCH3Q96I76 525 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 EPB41L4AQ9HCS5 686 aaPredicted RBP18.74■□□□□ 0.59
SVOP-202ENST00000548229 STX8Q9UNK0 236 aa18.74■□□□□ 0.59
SVOP-202ENST00000548229 DDX49Q9Y6V7 483 aaKnown RBP18.74■□□□□ 0.59
SVOP-202ENST00000548229 A6NJR5 290 aa18.73■□□□□ 0.59
SVOP-202ENST00000548229 EFCAB14O75071 495 aa18.73■□□□□ 0.59
SVOP-202ENST00000548229 ARHGEF15O94989 841 aa18.73■□□□□ 0.59
SVOP-202ENST00000548229 BAATQ14032 418 aaPredicted RBP18.73■□□□□ 0.59
SVOP-202ENST00000548229 ALYREFQ86V81 257 aaKnown RBP18.73■□□□□ 0.59
SVOP-202ENST00000548229 IFNL3Q8IZI9 196 aa18.73■□□□□ 0.59
SVOP-202ENST00000548229 GJD3Q8N144 294 aa18.73■□□□□ 0.59
SVOP-202ENST00000548229 KHSRPQ92945 711 aaKnown RBP eCLIP18.73■□□□□ 0.59
SVOP-202ENST00000548229 UBE2ZQ9H832 354 aaPredicted RBP18.73■□□□□ 0.59
SVOP-202ENST00000548229 SCN10AQ9Y5Y9 1956 aa18.73■□□□□ 0.59
SVOP-202ENST00000548229 SCN5AQ14524 2016 aa18.73■□□□□ 0.59
SVOP-202ENST00000548229 PUS10Q3MIT2 529 aaKnown RBP18.72■□□□□ 0.59
SVOP-202ENST00000548229 LEXMQ3ZCV2 418 aa18.72■□□□□ 0.59
SVOP-202ENST00000548229 FAM178BQ8IXR5 827 aa18.72■□□□□ 0.59
SVOP-202ENST00000548229 TGS1Q96RS0 853 aaKnown RBP18.72■□□□□ 0.59
SVOP-202ENST00000548229 RAD9AQ99638 391 aa18.72■□□□□ 0.59
SVOP-202ENST00000548229 KCNH6Q9H252 994 aa18.72■□□□□ 0.59
SVOP-202ENST00000548229 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.71■□□□□ 0.59
SVOP-202ENST00000548229 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
SVOP-202ENST00000548229 WDR5P61964 334 aaKnown RBP18.71■□□□□ 0.59
SVOP-202ENST00000548229 PDE4DQ08499 809 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms