RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 GATAD2BQ8WXI9 593 aa4□□□□□ -1.77
CEP290-204ENST00000547926 PDLIM7Q9NR12 457 aa4□□□□□ -1.77
CEP290-204ENST00000547926 RECKO95980 971 aa4□□□□□ -1.77
CEP290-204ENST00000547926 SNAP47Q5SQN1 464 aa4□□□□□ -1.77
CEP290-204ENST00000547926 HS2ST1Q7LGA3 356 aa4□□□□□ -1.77
CEP290-204ENST00000547926 CCDC84Q86UT8 332 aaPredicted RBP4□□□□□ -1.77
CEP290-204ENST00000547926 LGI4Q8N135 537 aa4□□□□□ -1.77
CEP290-204ENST00000547926 SLC12A9Q9BXP2 914 aa4□□□□□ -1.77
CEP290-204ENST00000547926 DBR1Q9UK59 544 aaKnown RBP4□□□□□ -1.77
CEP290-204ENST00000547926 MROH6A6NGR9 719 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 GSTM1P09488 218 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 GLI4P10075 376 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 EIF4A3P38919 411 aaKnown RBP3.99□□□□□ -1.77
CEP290-204ENST00000547926 PWP1Q13610 501 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 FAM26EQ8N5C1 309 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 LINC00482Q8N8I6 264 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 ANTXR1Q9H6X2 564 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 DLL4Q9NR61 685 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 KIAA1522Q9P206 1035 aaPredicted RBP3.99□□□□□ -1.77
CEP290-204ENST00000547926 ADAMTS1Q9UHI8 967 aa3.99□□□□□ -1.77
CEP290-204ENST00000547926 TLR3O15455 904 aaKnown RBP3.98□□□□□ -1.77
CEP290-204ENST00000547926 C8BP07358 591 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 CRKP46108 304 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 TGFB2P61812 414 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 FANCCQ00597 558 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 TXNDC5Q8NBS9 432 aaKnown RBP3.98□□□□□ -1.77
CEP290-204ENST00000547926 MRRFQ96E11 262 aaKnown RBP3.98□□□□□ -1.77
CEP290-204ENST00000547926 ZNF341Q9BYN7 854 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 A0A1W2PQJ5 194 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 PPP1R11O60927 126 aaPredicted RBP3.98□□□□□ -1.77
CEP290-204ENST00000547926 BPNT1O95861 308 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 ZNF76P36508 570 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 INHBEP58166 350 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 KRTAP10-9P60411 292 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 ZNF394Q53GI3 561 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 FAM196AQ6ZSG2 479 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 TTLL7Q6ZT98 887 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 JAMLQ86YT9 394 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 TMEM192Q8IY95 271 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 ZNF296Q8WUU4 475 aaPredicted RBP3.98□□□□□ -1.77
CEP290-204ENST00000547926 KCNQ5Q9NR82 932 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 SIT1Q9Y3P8 196 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 PCDHGB7Q9Y5F8 929 aa3.98□□□□□ -1.77
CEP290-204ENST00000547926 DDX3XO00571 662 aaKnown RBP eCLIP3.97□□□□□ -1.77
CEP290-204ENST00000547926 LAMTOR5O43504 91 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 GREM1O60565 184 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 RAG1P15918 1043 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 THBS2P35442 1172 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 RNF4P78317 190 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 REC114Q7Z4M0 266 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 ZNF428Q96B54 188 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 BCL11AQ9H165 835 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 DEF6Q9H4E7 631 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 UBP1Q9NZI7 540 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 SHOXO15266 292 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 RPL13P26373 211 aaKnown RBP3.97□□□□□ -1.77
CEP290-204ENST00000547926 CHMP4BP1P59074 171 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 CACNB2Q08289 660 aaPredicted RBP3.97□□□□□ -1.77
CEP290-204ENST00000547926 NAT16Q8N8M0 369 aa3.97□□□□□ -1.77
CEP290-204ENST00000547926 C11orf84Q9BUA3 381 aaPredicted RBP3.97□□□□□ -1.77
CEP290-204ENST00000547926 CCDC9Q9Y3X0 531 aaKnown RBP3.97□□□□□ -1.77
CEP290-204ENST00000547926 SUPT16HQ9Y5B9 1047 aaKnown RBP3.97□□□□□ -1.77
CEP290-204ENST00000547926 H0Y8X5 98 aa3.96□□□□□ -1.78
CEP290-204ENST00000547926 IL12RB1P42701 662 aa3.96□□□□□ -1.78
CEP290-204ENST00000547926 MPP2Q14168 576 aa3.96□□□□□ -1.78
CEP290-204ENST00000547926 CEP89Q96ST8 783 aa3.96□□□□□ -1.78
CEP290-204ENST00000547926 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.96□□□□□ -1.78
CEP290-204ENST00000547926 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
CEP290-204ENST00000547926 VAMP1P23763 118 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 RACK1P63244 317 aaKnown RBP3.95□□□□□ -1.78
CEP290-204ENST00000547926 DGCR2P98153 550 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 KIAA2012Q0VF49 1180 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 PRR31Q5SQ13 230 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 OVOS1Q6IE37 1185 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 USP48Q86UV5 1035 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 BRMS1Q9HCU9 246 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 PATE3B3GLJ2 98 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 FGF10O15520 208 aaPredicted RBP3.95□□□□□ -1.78
CEP290-204ENST00000547926 CWF19L2Q2TBE0 894 aaKnown RBP3.95□□□□□ -1.78
CEP290-204ENST00000547926 SEZ6Q53EL9 994 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 HLA-DQA1Q5Y7H0 255 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 METTL16Q86W50 562 aaKnown RBP3.95□□□□□ -1.78
CEP290-204ENST00000547926 RNF34Q969K3 372 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 TSPAN17Q96FV3 270 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 CDK5RAP1Q96SZ6 601 aaKnown RBP3.95□□□□□ -1.78
CEP290-204ENST00000547926 SPON2Q9BUD6 331 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 LRRC3Q9BY71 257 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 METTL5Q9NRN9 209 aaKnown RBP3.95□□□□□ -1.78
CEP290-204ENST00000547926 FBXL21Q9UKT6 434 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 RWDD3Q9Y3V2 267 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 PCDHB14Q9Y5E9 798 aa3.95□□□□□ -1.78
CEP290-204ENST00000547926 NPEPPSL1A6NEC2 478 aa3.94□□□□□ -1.78
CEP290-204ENST00000547926 SCAMP3O14828 347 aaKnown RBP3.94□□□□□ -1.78
CEP290-204ENST00000547926 IFNGR1P15260 489 aa3.94□□□□□ -1.78
CEP290-204ENST00000547926 APOBRQ0VD83 1088 aa3.94□□□□□ -1.78
CEP290-204ENST00000547926 CPA5Q8WXQ8 436 aa3.94□□□□□ -1.78
CEP290-204ENST00000547926 MBD6Q96DN6 1003 aa3.94□□□□□ -1.78
CEP290-204ENST00000547926 MKRN2Q9H000 416 aaKnown RBP3.94□□□□□ -1.78
CEP290-204ENST00000547926 PODXL2Q9NZ53 605 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms