RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ARVCFO00192 962 aa26.59■■□□□ 1.85
CHD4-214ENST00000545942 CHMLP26374 656 aa26.59■■□□□ 1.85
CHD4-214ENST00000545942 RPS6P62753 249 aaKnown RBP26.59■■□□□ 1.85
CHD4-214ENST00000545942 USH1GQ495M9 461 aa26.59■■□□□ 1.85
CHD4-214ENST00000545942 LRRC37A2A6NM11 1700 aa26.59■■□□□ 1.85
CHD4-214ENST00000545942 ZEB2O60315 1214 aa26.58■■□□□ 1.85
CHD4-214ENST00000545942 CABYRO75952 493 aa26.58■■□□□ 1.85
CHD4-214ENST00000545942 PARP1P09874 1014 aaKnown RBP26.58■■□□□ 1.85
CHD4-214ENST00000545942 CDC37Q16543 378 aaPredicted RBP26.58■■□□□ 1.85
CHD4-214ENST00000545942 IFIT1BQ5T764 474 aaKnown RBP26.58■■□□□ 1.85
CHD4-214ENST00000545942 DNERQ8NFT8 737 aa26.58■■□□□ 1.85
CHD4-214ENST00000545942 MPHOSPH6Q99547 160 aaKnown RBP26.58■■□□□ 1.85
CHD4-214ENST00000545942 TBX21Q9UL17 535 aa26.58■■□□□ 1.85
CHD4-214ENST00000545942 LCTP09848 1927 aa26.57■■□□□ 1.84
CHD4-214ENST00000545942 PTGS1P23219 599 aa26.57■■□□□ 1.84
CHD4-214ENST00000545942 CXCL17Q6UXB2 119 aa26.57■■□□□ 1.84
CHD4-214ENST00000545942 ADGRF4Q8IZF3 695 aa26.57■■□□□ 1.84
CHD4-214ENST00000545942 RGS22Q8NE09 1264 aa26.57■■□□□ 1.84
CHD4-214ENST00000545942 MTMR10Q9NXD2 777 aa26.57■■□□□ 1.84
CHD4-214ENST00000545942 FPGSQ05932 587 aa26.56■■□□□ 1.84
CHD4-214ENST00000545942 TRDNQ13061 729 aa26.56■■□□□ 1.84
CHD4-214ENST00000545942 DUSP28Q4G0W2 176 aa26.56■■□□□ 1.84
CHD4-214ENST00000545942 TMEM63BQ5T3F8 832 aa26.56■■□□□ 1.84
CHD4-214ENST00000545942 MAF1Q9H063 256 aa26.56■■□□□ 1.84
CHD4-214ENST00000545942 U3KPZ7 1027 aaPredicted RBP26.56■■□□□ 1.84
CHD4-214ENST00000545942 TLR3O15455 904 aaKnown RBP26.55■■□□□ 1.84
CHD4-214ENST00000545942 TIMP1P01033 207 aa26.55■■□□□ 1.84
CHD4-214ENST00000545942 PDE4DQ08499 809 aa26.55■■□□□ 1.84
CHD4-214ENST00000545942 FAM109BQ6ICB4 259 aaPredicted RBP26.55■■□□□ 1.84
CHD4-214ENST00000545942 FAM126BQ8IXS8 530 aa26.55■■□□□ 1.84
CHD4-214ENST00000545942 WDR11Q9BZH6 1224 aa26.55■■□□□ 1.84
CHD4-214ENST00000545942 ABCB11O95342 1321 aa26.55■■□□□ 1.84
CHD4-214ENST00000545942 RBM47A0AV96 593 aaKnown RBP26.54■■□□□ 1.84
CHD4-214ENST00000545942 B4DLN1 442 aa26.54■■□□□ 1.84
CHD4-214ENST00000545942 DHX16O60231 1041 aaKnown RBP26.54■■□□□ 1.84
CHD4-214ENST00000545942 EDNRBP24530 442 aa26.54■■□□□ 1.84
CHD4-214ENST00000545942 MRPL12P52815 198 aaKnown RBP26.54■■□□□ 1.84
CHD4-214ENST00000545942 PTH1RQ03431 593 aa26.54■■□□□ 1.84
CHD4-214ENST00000545942 SEC23AQ15436 765 aa26.54■■□□□ 1.84
CHD4-214ENST00000545942 CYP21A2P08686 494 aa26.53■■□□□ 1.84
CHD4-214ENST00000545942 EPHB4P54760 987 aa26.53■■□□□ 1.84
CHD4-214ENST00000545942 QRICH1Q2TAL8 776 aa26.53■■□□□ 1.84
CHD4-214ENST00000545942 CYB5R4Q7L1T6 521 aa26.53■■□□□ 1.84
CHD4-214ENST00000545942 SLC43A3Q8NBI5 491 aa26.53■■□□□ 1.84
CHD4-214ENST00000545942 SEZ6LQ9BYH1 1024 aa26.53■■□□□ 1.84
CHD4-214ENST00000545942 SGSM2O43147 1006 aa26.52■■□□□ 1.84
CHD4-214ENST00000545942 ITGA7Q13683 1181 aa26.52■■□□□ 1.84
CHD4-214ENST00000545942 RNPC3Q96LT9 517 aaKnown RBP26.52■■□□□ 1.84
CHD4-214ENST00000545942 JMJD4Q9H9V9 463 aa26.52■■□□□ 1.84
CHD4-214ENST00000545942 VAT1LQ9HCJ6 419 aa26.52■■□□□ 1.84
CHD4-214ENST00000545942 CD4P01730 458 aa26.51■■□□□ 1.83
CHD4-214ENST00000545942 MFSD5Q6N075 450 aa26.51■■□□□ 1.83
CHD4-214ENST00000545942 FBXO11Q86XK2 927 aa26.51■■□□□ 1.83
CHD4-214ENST00000545942 MCF2L2Q86YR7 1114 aa26.51■■□□□ 1.83
CHD4-214ENST00000545942 STXBP5LQ9Y2K9 1186 aa26.51■■□□□ 1.83
CHD4-214ENST00000545942 MRPL11Q9Y3B7 192 aaKnown RBP26.51■■□□□ 1.83
CHD4-214ENST00000545942 SMAD3P84022 425 aaKnown RBP26.5■■□□□ 1.83
CHD4-214ENST00000545942 PPP2R5BQ15173 497 aa26.5■■□□□ 1.83
CHD4-214ENST00000545942 RALYLQ86SE5 291 aaKnown RBP26.5■■□□□ 1.83
CHD4-214ENST00000545942 STAG2Q8N3U4 1231 aa26.5■■□□□ 1.83
CHD4-214ENST00000545942 SCFD2Q8WU76 684 aa26.5■■□□□ 1.83
CHD4-214ENST00000545942 LAMA2P24043 3122 aaKnown RBP26.5■■□□□ 1.83
CHD4-214ENST00000545942 GRIN2DO15399 1336 aa26.49■■□□□ 1.83
CHD4-214ENST00000545942 KLRF2D3W0D1 207 aa26.49■■□□□ 1.83
CHD4-214ENST00000545942 NKRFO15226 690 aaKnown RBP eCLIP26.49■■□□□ 1.83
CHD4-214ENST00000545942 CPT1AP50416 773 aa26.49■■□□□ 1.83
CHD4-214ENST00000545942 ZNF697Q5TEC3 545 aa26.49■■□□□ 1.83
CHD4-214ENST00000545942 OR6J1Q8NGC5 347 aa26.49■■□□□ 1.83
CHD4-214ENST00000545942 TBC1D5Q92609 795 aa26.49■■□□□ 1.83
CHD4-214ENST00000545942 POLR3EQ9NVU0 708 aa26.49■■□□□ 1.83
CHD4-214ENST00000545942 ERICH2A1L162 156 aa26.48■■□□□ 1.83
CHD4-214ENST00000545942 IFIT3O14879 490 aaKnown RBP26.48■■□□□ 1.83
CHD4-214ENST00000545942 PSMC6P62333 389 aa26.48■■□□□ 1.83
CHD4-214ENST00000545942 PPIGQ13427 754 aaKnown RBP eCLIP26.48■■□□□ 1.833e-10■■■■■ 37.4
CHD4-214ENST00000545942 TMEM199Q8N511 208 aa26.48■■□□□ 1.83
CHD4-214ENST00000545942 NCOA7Q8NI08 942 aa26.48■■□□□ 1.83
CHD4-214ENST00000545942 SYTL5Q8TDW5 730 aaPredicted RBP26.48■■□□□ 1.83
CHD4-214ENST00000545942 PPP1R12CQ9BZL4 782 aa26.48■■□□□ 1.83
CHD4-214ENST00000545942 MAD2L2Q9UI95 211 aa26.48■■□□□ 1.83
CHD4-214ENST00000545942 E7EWF7 191 aa26.47■■□□□ 1.83
CHD4-214ENST00000545942 SART3Q15020 963 aaKnown RBP26.47■■□□□ 1.83
CHD4-214ENST00000545942 BRDTQ58F21 947 aaPredicted RBP26.47■■□□□ 1.83
CHD4-214ENST00000545942 NSUN6Q8TEA1 469 aaKnown RBP26.47■■□□□ 1.83
CHD4-214ENST00000545942 MAP4K1Q92918 833 aa26.47■■□□□ 1.83
CHD4-214ENST00000545942 AMNQ9BXJ7 453 aa26.47■■□□□ 1.83
CHD4-214ENST00000545942 COL6A3P12111 3177 aa26.47■■□□□ 1.83
CHD4-214ENST00000545942 PALM3A6NDB9 673 aaPredicted RBP26.46■■□□□ 1.83
CHD4-214ENST00000545942 TXNP10599 105 aaKnown RBP26.46■■□□□ 1.83
CHD4-214ENST00000545942 TTLL4Q14679 1199 aa26.46■■□□□ 1.83
CHD4-214ENST00000545942 TAAR1Q96RJ0 339 aa26.46■■□□□ 1.83
CHD4-214ENST00000545942 COL20A1Q9P218 1284 aa26.46■■□□□ 1.83
CHD4-214ENST00000545942 TAF6LQ9Y6J9 622 aa26.46■■□□□ 1.83
CHD4-214ENST00000545942 CSF2RAP15509 400 aa26.45■■□□□ 1.83
CHD4-214ENST00000545942 PURAQ00577 322 aaKnown RBP26.45■■□□□ 1.83
CHD4-214ENST00000545942 MTMR8Q96EF0 704 aa26.45■■□□□ 1.83
CHD4-214ENST00000545942 FAM161BQ96MY7 647 aa26.45■■□□□ 1.83
CHD4-214ENST00000545942 IWS1Q96ST2 819 aa26.45■■□□□ 1.83
CHD4-214ENST00000545942 RMDN3Q96TC7 470 aa26.45■■□□□ 1.83
CHD4-214ENST00000545942 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.45■■□□□ 1.832e-9■□□□□ 9.3
CHD4-214ENST00000545942 HIPK3Q9H422 1215 aa26.45■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms