RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 NEK8Q86SG6 692 aa17.64■□□□□ 0.41
LDLR-204ENST00000545707 DRC1Q96MC2 740 aa17.64■□□□□ 0.41
LDLR-204ENST00000545707 JADE2Q9NQC1 790 aa17.64■□□□□ 0.41
LDLR-204ENST00000545707 FAM207AQ9NSI2 230 aaPredicted RBP17.64■□□□□ 0.41
LDLR-204ENST00000545707 LRWD1Q9UFC0 647 aa17.64■□□□□ 0.41
LDLR-204ENST00000545707 LAD1O00515 517 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 CAPN2P17655 700 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 BTDP43251 543 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 TUBB4BP68371 445 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 MRPS25P82663 173 aaKnown RBP17.63■□□□□ 0.41
LDLR-204ENST00000545707 RAD51AP2Q09MP3 1159 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 PAPD7Q5XG87 772 aaKnown RBP17.63■□□□□ 0.41
LDLR-204ENST00000545707 ARHGEF1Q92888 912 aaKnown RBP17.63■□□□□ 0.41
LDLR-204ENST00000545707 CEP95Q96GE4 821 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 C7orf25Q9BPX7 421 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 FRMPD2Q68DX3 1309 aaPredicted RBP17.63■□□□□ 0.41
LDLR-204ENST00000545707 USP17L5A8MUK1 530 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 RPS6KA4O75676 772 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 MYBL2P10244 700 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 IDEP14735 1019 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 WDR93Q6P2C0 686 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 KRT25Q7Z3Z0 450 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 CAGE1Q8TC20 777 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 UIMC1Q96RL1 719 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 C6orf50Q9HD87 102 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 CASZ1Q86V15 1759 aa17.63■□□□□ 0.41
LDLR-204ENST00000545707 GLIS3Q8NEA6 775 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 NOC3LQ8WTT2 800 aaKnown RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 COA7Q96BR5 231 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 RTFDC1Q9BY42 306 aaPredicted RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 GBP3Q9H0R5 595 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 CNTNAP4Q9C0A0 1308 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 ROBO1Q9Y6N7 1651 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 BICDL2A1A5D9 508 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 MYMKA6NI61 221 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 EIF3CLB5ME19 914 aaKnown RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 IPO7O95373 1038 aaKnown RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 C2orf54Q08AI8 447 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 SOGA3Q5TF21 947 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 GJA10Q969M2 543 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 RRP36Q96EU6 259 aaKnown RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 CCDC42Q96M95 316 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 AK8Q96MA6 479 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 PSMB7Q99436 277 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 EIF3CQ99613 913 aaKnown RBP17.62■□□□□ 0.41
LDLR-204ENST00000545707 SPZ1Q9BXG8 430 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 MLXIPQ9HAP2 919 aa17.62■□□□□ 0.41
LDLR-204ENST00000545707 ROBO3Q96MS0 1386 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 GRB10Q13322 594 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 LRRC41Q15345 812 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 HSP90B2PQ58FF3 399 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 FOXR1Q6PIV2 292 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 TMED8Q6PL24 325 aaPredicted RBP17.61■□□□□ 0.41
LDLR-204ENST00000545707 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 CLEC10AQ8IUN9 316 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 TEX11Q8IYF3 940 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 NUDT12Q9BQG2 462 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 NUP58Q9BVL2 599 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 BLOC1S4Q9NUP1 217 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 SEC63Q9UGP8 760 aaKnown RBP17.61■□□□□ 0.41
LDLR-204ENST00000545707 LCMT1Q9UIC8 334 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 POTEMA6NI47 508 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 SLC37A4O43826 429 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 TDP2O95551 362 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 PPP4CP60510 307 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.61■□□□□ 0.41
LDLR-204ENST00000545707 BARGINQ6ZT62 677 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 MMRN2Q9H8L6 949 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 ARHGAP20Q9P2F6 1191 aa17.61■□□□□ 0.41
LDLR-204ENST00000545707 GNA11P29992 359 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 GSTO1P78417 241 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 KIF5AQ12840 1032 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 REXO1Q8N1G1 1221 aaKnown RBP17.6■□□□□ 0.41
LDLR-204ENST00000545707 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 PSD3Q9NYI0 1048 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 SMARCAL1Q9NZC9 954 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 CAPN6Q9Y6Q1 641 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 TULP2O00295 520 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 ACTN2P35609 894 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 EZH2Q15910 746 aaKnown RBP17.6■□□□□ 0.41
LDLR-204ENST00000545707 FKBP15Q5T1M5 1219 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 SV2BQ7L1I2 683 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 FAM114A1Q8IWE2 563 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 ZSCAN29Q8IWY8 852 aaPredicted RBP17.6■□□□□ 0.41
LDLR-204ENST00000545707 CCDC170Q8IYT3 715 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 ANKRD13CQ8N6S4 541 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 SECISBP2LQ93073 1101 aaKnown RBP17.6■□□□□ 0.41
LDLR-204ENST00000545707 PNMA5Q96PV4 448 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
LDLR-204ENST00000545707 SNED1Q8TER0 1413 aa17.59■□□□□ 0.41
LDLR-204ENST00000545707 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
LDLR-204ENST00000545707 EDIL3O43854 480 aa17.59■□□□□ 0.41
LDLR-204ENST00000545707 MOCS3O95396 460 aa17.59■□□□□ 0.41
LDLR-204ENST00000545707 CXCR5P32302 372 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms