RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 DOCK3Q8IZD9 2030 aa15.97■□□□□ 0.15
TSEN54-203ENST00000545228 ZNF536O15090 1300 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 CYTH3O43739 400 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 RGS2P41220 211 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 MCTP2Q6DN12 878 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 ANKRD35Q8N283 1001 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 RGS22Q8NE09 1264 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 DDX11Q96FC9 970 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 SLC26A6Q9BXS9 759 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 CRISPLD2Q9H0B8 497 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.96■□□□□ 0.15
TSEN54-203ENST00000545228 CPVLQ9H3G5 476 aa15.96■□□□□ 0.15
TSEN54-203ENST00000545228 HMGCRP04035 888 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 SCG2P13521 617 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 PTPREP23469 700 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 BECN1Q14457 450 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 PFKFB3Q16875 520 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-203ENST00000545228 Q3C1V9 767 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 HEATR3Q7Z4Q2 680 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 BICD2Q8TD16 824 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 SNX21Q969T3 373 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 PAWRQ96IZ0 340 aaKnown RBP15.95■□□□□ 0.14
TSEN54-203ENST00000545228 AGBL1Q96MI9 1066 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 PORCNQ9H237 461 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 PRO3102Q9H379 93 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
TSEN54-203ENST00000545228 SH3GLB2Q9NR46 395 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
TSEN54-203ENST00000545228 FAM217BQ9NTX9 383 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-203ENST00000545228 V9GY48 417 aaPredicted RBP15.95■□□□□ 0.14
TSEN54-203ENST00000545228 SMCHD1A6NHR9 2005 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 LOC102724159A0A0B4J2E5 919 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 K7ELQ4 463 aaPredicted RBP15.94■□□□□ 0.14
TSEN54-203ENST00000545228 GNA11P29992 359 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 NAPAP54920 295 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 FUT2Q10981 343 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 TRIM29Q14134 588 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 GRB14Q14449 540 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 PWP2Q15269 919 aaKnown RBP15.94■□□□□ 0.14
TSEN54-203ENST00000545228 NTRK3Q16288 839 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 NECAB2Q7Z6G3 386 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 DPP9Q86TI2 863 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 FAM184AQ8NB25 1140 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 APBA2Q99767 749 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 LARP6Q9BRS8 491 aaKnown RBP15.94■□□□□ 0.14
TSEN54-203ENST00000545228 EHMT1Q9H9B1 1298 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 ADD3Q9UEY8 706 aaKnown RBP15.94■□□□□ 0.14
TSEN54-203ENST00000545228 GJD2Q9UKL4 321 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 RPTORQ8N122 1335 aa15.94■□□□□ 0.14
TSEN54-203ENST00000545228 HSP90AA1P07900 732 aaKnown RBP15.93■□□□□ 0.14
TSEN54-203ENST00000545228 SNAP25P60880 206 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 MAP2K5Q13163 448 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 RNF207Q6ZRF8 634 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 CCDC83Q8IWF9 413 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 CMTR1Q8N1G2 835 aaKnown RBP15.93■□□□□ 0.14
TSEN54-203ENST00000545228 ANKLE1Q8NAG6 615 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 PIBF1Q8WXW3 757 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 TMX3Q96JJ7 454 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 BRMS1Q9HCU9 246 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 HMX1Q9NP08 348 aaPredicted RBP15.93■□□□□ 0.14
TSEN54-203ENST00000545228 BARHL2Q9NY43 387 aa15.93■□□□□ 0.14
TSEN54-203ENST00000545228 DIS3Q9Y2L1 958 aaKnown RBP15.93■□□□□ 0.14
TSEN54-203ENST00000545228 A0A1W2PPC1 479 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 PTPDC1A2A3K4 754 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 XRCC5P13010 732 aaKnown RBP15.92■□□□□ 0.14
TSEN54-203ENST00000545228 CALML3P27482 149 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 ADORA2AP29274 412 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 GALNT17Q6IS24 598 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 NSMFQ6X4W1 530 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 MSL3Q8N5Y2 521 aaKnown RBP15.92■□□□□ 0.14
TSEN54-203ENST00000545228 PHKBQ93100 1093 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 C6orf50Q9HD87 102 aa15.92■□□□□ 0.14
TSEN54-203ENST00000545228 ORC3Q9UBD5 711 aaPredicted RBP15.92■□□□□ 0.14
TSEN54-203ENST00000545228 CEP290O15078 2479 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 TRIOBPQ9H2D6 2365 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 ESYT2A0FGR8 921 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 POTEB2H3BUK9 544 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 GCOM1H8Y6P7 765 aaPredicted RBP15.91■□□□□ 0.14
TSEN54-203ENST00000545228 POLR2MP0CAP2 368 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 CYP2B6P20813 491 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 POTEEQ6S8J3 1075 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 NECAB1Q8N987 351 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 DNERQ8NFT8 737 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 DIS3LQ8TF46 1054 aaKnown RBP15.91■□□□□ 0.14
TSEN54-203ENST00000545228 A1CFQ9NQ94 594 aaKnown RBP15.91■□□□□ 0.14
TSEN54-203ENST00000545228 RIPK3Q9Y572 518 aa15.91■□□□□ 0.14
TSEN54-203ENST00000545228 LARGE1O95461 756 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 CFBP00751 764 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 HOXC6P09630 235 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 PDIA4P13667 645 aaKnown RBP15.9■□□□□ 0.14
TSEN54-203ENST00000545228 ADCY7P51828 1080 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 GHRHRQ02643 423 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 TRIM32Q13049 653 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 MORN1Q5T089 497 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 WWC2Q6AWC2 1192 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 ZNF467Q7Z7K2 595 aaPredicted RBP15.9■□□□□ 0.14
TSEN54-203ENST00000545228 NSUN7Q8NE18 718 aaKnown RBP15.9■□□□□ 0.14
TSEN54-203ENST00000545228 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
TSEN54-203ENST00000545228 INTS4Q96HW7 963 aaKnown RBP15.9■□□□□ 0.14
TSEN54-203ENST00000545228 PSTPIP2Q9H939 334 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms