RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 CALML3P27482 149 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 MCM5P33992 734 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 MRPL12P52815 198 aaKnown RBP16.2■□□□□ 0.18
VAMP1-208ENST00000544432 ACLYP53396 1101 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 TRAF1Q13077 416 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 KCNA10Q16322 511 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 RNF20Q5VTR2 975 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 FERMT2Q96AC1 680 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 TMEM87BQ96K49 555 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
VAMP1-208ENST00000544432 ELP1O95163 1332 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 CTAGE5O15320 804 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 SYN1P17600 705 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 MAGEA10P43363 369 aaPredicted RBP16.19■□□□□ 0.18
VAMP1-208ENST00000544432 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
VAMP1-208ENST00000544432 GHRHRQ02643 423 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 TSGA10IPQ3SY00 556 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 LY9Q9HBG7 655 aa16.19■□□□□ 0.18
VAMP1-208ENST00000544432 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
VAMP1-208ENST00000544432 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.18■□□□□ 0.18
VAMP1-208ENST00000544432 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 PRC1O43663 620 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 DDAH1O94760 285 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 C6orf222P0C671 652 aaPredicted RBP16.18■□□□□ 0.18
VAMP1-208ENST00000544432 SMPD1P17405 629 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 SMARCA1P28370 1054 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 LIFRP42702 1097 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 TRIM60Q495X7 471 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 GNASQ5JWF2 1037 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 FBXO16Q8IX29 292 aaPredicted RBP16.18■□□□□ 0.18
VAMP1-208ENST00000544432 SYTL5Q8TDW5 730 aaPredicted RBP16.18■□□□□ 0.18
VAMP1-208ENST00000544432 TOX2Q96NM4 488 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 PDGFCQ9NRA1 345 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 ATP11BQ9Y2G3 1177 aa16.18■□□□□ 0.18
VAMP1-208ENST00000544432 LCTP09848 1927 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 ASGR1P07306 291 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 PDE4DQ08499 809 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 SLC35G1Q2M3R5 365 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 DUSP28Q4G0W2 176 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 NOL8Q76FK4 1167 aaKnown RBP16.17■□□□□ 0.18
VAMP1-208ENST00000544432 EEPD1Q7L9B9 569 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 ANKRD33Q7Z3H0 272 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 ZNF654Q8IZM8 581 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 GLT1D1Q96MS3 346 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 IWS1Q96ST2 819 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 AP5M1Q9H0R1 490 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 STARD7Q9NQZ5 370 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 PRKAG2Q9UGJ0 569 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
VAMP1-208ENST00000544432 DDX49Q9Y6V7 483 aaKnown RBP16.17■□□□□ 0.18
VAMP1-208ENST00000544432 PNMA6FA0A0J9YX94 578 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 SH2B2O14492 632 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-208ENST00000544432 DYNC1LI2O43237 492 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-208ENST00000544432 CYTH3O43739 400 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 PPP1R11O60927 126 aaPredicted RBP16.16■□□□□ 0.18
VAMP1-208ENST00000544432 CABYRO75952 493 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 KIF5BP33176 963 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 GNAQP50148 359 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 HSD17B4P51659 736 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 TLE2Q04725 743 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 FSCN1Q16658 493 aaKnown RBP16.16■□□□□ 0.18
VAMP1-208ENST00000544432 TLK2Q86UE8 772 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
VAMP1-208ENST00000544432 LZTS2Q9BRK4 669 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 SEZ6LQ9BYH1 1024 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 WDR11Q9BZH6 1224 aa16.16■□□□□ 0.18
VAMP1-208ENST00000544432 OPLAHO14841 1288 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
VAMP1-208ENST00000544432 ZEB2O60315 1214 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 CALM1P0DP23 149 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 CALM2P0DP24 149 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 CALM3P0DP25 149 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 CDK7P50613 346 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 IRX5P78411 483 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-208ENST00000544432 KRT32Q14532 448 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 SGMS1Q86VZ5 419 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-208ENST00000544432 SCFD2Q8WU76 684 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 TAAR1Q96RJ0 339 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 PIGSQ96S52 555 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 LBHD1Q9BQE6 289 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-208ENST00000544432 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 UBE2OQ9C0C9 1292 aaKnown RBP16.15■□□□□ 0.18
VAMP1-208ENST00000544432 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-208ENST00000544432 PDLIM7Q9NR12 457 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 COL20A1Q9P218 1284 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 MROH7Q68CQ1 1323 aa16.15■□□□□ 0.18
VAMP1-208ENST00000544432 LRRC37A2A6NM11 1700 aa16.14■□□□□ 0.17
VAMP1-208ENST00000544432 CCDC69A6NI79 296 aa16.14■□□□□ 0.17
VAMP1-208ENST00000544432 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
VAMP1-208ENST00000544432 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
VAMP1-208ENST00000544432 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms