RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 CLTAP09496 248 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 LONP1P36776 959 aaKnown RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 NEDD9Q14511 834 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 SNCBQ16143 134 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 ADAT2Q7Z6V5 191 aaKnown RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 VPS36Q86VN1 386 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
ABCB1-210ENST00000543898 SNX12Q9UMY4 172 aa9.48□□□□□ -0.89
ABCB1-210ENST00000543898 ANO9A1A5B4 782 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 TSPY3P0CV98 308 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 TSPY8P0CW00 308 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 DYNLL1P63167 89 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 KLHL30Q0D2K2 578 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 LRRC41Q15345 812 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 EARS2Q5JPH6 523 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 RUFY4Q6ZNE9 571 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 HPS3Q969F9 1004 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 LRRC45Q96CN5 670 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 RAB34Q9BZG1 259 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 NUCKS1Q9H1E3 243 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 EPB41L4AQ9HCS5 686 aaPredicted RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 CHUKO15111 745 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 NMT2O60551 498 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 GYG1P46976 350 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 POLR2FP61218 127 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 HERVK_113P62684 666 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 GFPT1Q06210 699 aaPredicted RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 SFMBT2Q5VUG0 894 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 SPATS2Q86XZ4 545 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 RSRC1Q96IZ7 334 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 PRPF3O43395 683 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 KRT13P13646 458 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 NAA35Q5VZE5 725 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 ZIM3Q96PE6 472 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 MED15Q96RN5 788 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 TACO1Q9BSH4 297 aaKnown RBP9.47□□□□□ -0.89
ABCB1-210ENST00000543898 THAP9Q9H5L6 903 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 DISC1Q9NRI5 854 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 PLAAQ9Y263 795 aa9.47□□□□□ -0.89
ABCB1-210ENST00000543898 PDE2AO00408 941 aaPredicted RBP9.46□□□□□ -0.89
ABCB1-210ENST00000543898 GOLGA8HP0CJ92 632 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 CARSP49589 748 aaKnown RBP9.46□□□□□ -0.89
ABCB1-210ENST00000543898 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 NT5DC1Q5TFE4 455 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 FBXL16Q8N461 479 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 RETREG2Q8NC44 543 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 TCP11Q8WWU5 503 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 JCADQ9P266 1359 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 XDHP47989 1333 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 GKAP1Q5VSY0 366 aaPredicted RBP9.46□□□□□ -0.89
ABCB1-210ENST00000543898 CCDC25Q86WR0 208 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 ENAHQ8N8S7 591 aaPredicted RBP9.46□□□□□ -0.89
ABCB1-210ENST00000543898 RNPC3Q96LT9 517 aaKnown RBP9.46□□□□□ -0.89
ABCB1-210ENST00000543898 YY1AP1Q9H869 796 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 RBM12Q9NTZ6 932 aaKnown RBP9.46□□□□□ -0.89
ABCB1-210ENST00000543898 NOVA2Q9UNW9 492 aaKnown RBP9.46□□□□□ -0.89
ABCB1-210ENST00000543898 SH3BP1Q9Y3L3 701 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 TECPR2O15040 1411 aa9.46□□□□□ -0.89
ABCB1-210ENST00000543898 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 CCNE1P24864 410 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 HLFQ16534 295 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 NLRP14Q86W24 1093 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 DHTKD1Q96HY7 919 aaPredicted RBP9.46□□□□□ -0.9
ABCB1-210ENST00000543898 CCT8L2Q96SF2 557 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 LSM14BQ9BX40 385 aaKnown RBP9.46□□□□□ -0.9
ABCB1-210ENST00000543898 AP1M1Q9BXS5 423 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 KLC4Q9NSK0 619 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 SAMD15Q9P1V8 674 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 PXDNQ92626 1479 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 LSP1P33241 339 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 PEX19P40855 299 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 CASP7P55210 303 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 TFAP4Q01664 338 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 NBPF20Q3BBV1 942 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 ZFYVE27Q5T4F4 411 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 KRT79Q5XKE5 535 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 DAAM2Q86T65 1068 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 NKX2-3Q8TAU0 364 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 TBC1D5Q92609 795 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 SUFUQ9UMX1 484 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 CAPN6Q9Y6Q1 641 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 HEG1Q9ULI3 1381 aa9.46□□□□□ -0.9
ABCB1-210ENST00000543898 FAM237AA0A1B0GTK4 181 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 PLCG1P19174 1290 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 IFI16Q16666 785 aaKnown RBP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 HIBCHQ6NVY1 386 aaPredicted RBP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 ELOA2Q8IYF1 753 aaPredicted RBP9.45□□□□□ -0.9
ABCB1-210ENST00000543898 STAG1Q8WVM7 1258 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 NDST4Q9H3R1 872 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 TSKSQ9UJT2 592 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 ASAP1Q9ULH1 1129 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 PEAK1Q9H792 1746 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 LRRC53A6NM62 1247 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 KRIT1O00522 736 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 RPS6KA5O75582 802 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 PALMO75781 387 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 PPP1R37O75864 691 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 FCER1AP12319 257 aa9.45□□□□□ -0.9
ABCB1-210ENST00000543898 TNNI2P48788 182 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms