RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 EDIL3O43854 480 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 FECHP22830 423 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 ATP2B2Q01814 1243 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 CCDC96Q2M329 555 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 GLIPR1L2Q4G1C9 344 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 RAD9BQ6WBX8 426 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 CREBRFQ8IUR6 639 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 CNKSR1Q969H4 720 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 CCDC47Q96A33 483 aaKnown RBP15.62■□□□□ 0.09
MSH2-206ENST00000543555 CALML4Q96GE6 196 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 DNAJC18Q9H819 358 aa15.62■□□□□ 0.09
MSH2-206ENST00000543555 ZNF277Q9NRM2 450 aaPredicted RBP15.62■□□□□ 0.09
MSH2-206ENST00000543555 SLC37A4O43826 429 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 TDP2O95551 362 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 CCDC175P0C221 793 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 SLURP2P0DP57 97 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.093e-6■■■□□ 15.6
MSH2-206ENST00000543555 KIAA0825Q8IV33 1275 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 MRIQ9BWK5 157 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 FKBP1AP62942 108 aaKnown RBP15.61■□□□□ 0.09
MSH2-206ENST00000543555 AMPD3Q01432 767 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 ELF2Q15723 593 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 STRIP1Q5VSL9 837 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 TTI2Q6NXR4 508 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 DHTKD1Q96HY7 919 aaPredicted RBP15.61■□□□□ 0.09
MSH2-206ENST00000543555 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 THAP9Q9H5L6 903 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 EXOC1Q9NV70 894 aa15.61■□□□□ 0.09
MSH2-206ENST00000543555 EEF1GP26641 437 aaKnown RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 SLC16A2P36021 539 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 CLK2P49760 499 aaKnown RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 GNG11P61952 73 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 ASIC1P78348 528 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 PDE4DQ08499 809 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 TRIM14Q14142 442 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 STYK1Q6J9G0 422 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 KCTD1Q719H9 257 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 MTMR8Q96EF0 704 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 DHX36Q9H2U1 1008 aaKnown RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 LRWD1Q9UFC0 647 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 PCDHAC2Q9Y5I4 1007 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 ZBTB5O15062 677 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 URI1O94763 535 aaPredicted RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 TNNI2P48788 182 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 CACNB3P54284 484 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 TMEM266Q2M3C6 531 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 DACT2Q5SW24 774 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 FHDC1Q9C0D6 1143 aaPredicted RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 MRPL44Q9H9J2 332 aaKnown RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 ADGRG1Q9Y653 693 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 USP17L10C9JJH3 530 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 UBXN1Q04323 297 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 GRB10Q13322 594 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 UBE2SQ16763 222 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 LRRN4CLQ8ND94 238 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 NOC3LQ8WTT2 800 aaKnown RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 CUL5Q93034 780 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 WDR24Q96S15 920 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 SRRTQ9BXP5 876 aaKnown RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 GTPBP4Q9BZE4 634 aaKnown RBP15.6■□□□□ 0.09
MSH2-206ENST00000543555 SPON1Q9HCB6 807 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 ABHD10Q9NUJ1 306 aa15.6■□□□□ 0.09
MSH2-206ENST00000543555 HDLBPQ00341 1268 aaKnown RBP15.59■□□□□ 0.09
MSH2-206ENST00000543555 TCP10Q12799 353 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 PPP4R3AQ6IN85 833 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 C7orf43Q8WVR3 580 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 PIM2Q9P1W9 311 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 STK17AQ9UEE5 414 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 LGALS16A8MUM7 142 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 ECE2O60344 883 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 CASQ1P31415 396 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 PPP1R2P41236 205 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 MRPL12P52815 198 aaKnown RBP15.59■□□□□ 0.09
MSH2-206ENST00000543555 ZNF397Q8NF99 534 aaPredicted RBP15.59■□□□□ 0.09
MSH2-206ENST00000543555 PNMA5Q96PV4 448 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 IDI2Q9BXS1 227 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 RAB34Q9BZG1 259 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 BLOC1S4Q9NUP1 217 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 FAM198AQ9UFP1 575 aa15.59■□□□□ 0.09
MSH2-206ENST00000543555 SIPA1L1O43166 1804 aa15.58■□□□□ 0.09
MSH2-206ENST00000543555 DDTLA6NHG4 134 aaPredicted RBP15.58■□□□□ 0.09
MSH2-206ENST00000543555 FAM196BA6NMK8 535 aa15.58■□□□□ 0.09
MSH2-206ENST00000543555 CCNE1P24864 410 aa15.58■□□□□ 0.09
MSH2-206ENST00000543555 STK4Q13043 487 aa15.58■□□□□ 0.09
MSH2-206ENST00000543555 PDIA5Q14554 519 aa15.58■□□□□ 0.09
MSH2-206ENST00000543555 P2RX5Q93086 422 aa15.58■□□□□ 0.09
MSH2-206ENST00000543555 NUP88Q99567 741 aaPredicted RBP15.58■□□□□ 0.09
MSH2-206ENST00000543555 DUSP9Q99956 384 aaKnown RBP15.58■□□□□ 0.09
MSH2-206ENST00000543555 MAGEC2Q9UBF1 373 aaPredicted RBP15.58■□□□□ 0.09
MSH2-206ENST00000543555 PI4KBQ9UBF8 816 aa15.58■□□□□ 0.09
MSH2-206ENST00000543555 MYH4Q9Y623 1939 aa15.58■□□□□ 0.08
MSH2-206ENST00000543555 RNF225M0QZC1 329 aaPredicted RBP15.58■□□□□ 0.08
MSH2-206ENST00000543555 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.081e-6■■□□□ 13.4
MSH2-206ENST00000543555 SV2BQ7L1I2 683 aa15.58■□□□□ 0.08
MSH2-206ENST00000543555 TMTC1Q8IUR5 882 aa15.58■□□□□ 0.08
MSH2-206ENST00000543555 MB21D1Q8N884 522 aa15.58■□□□□ 0.08
MSH2-206ENST00000543555 MKL1Q969V6 931 aa15.58■□□□□ 0.08
MSH2-206ENST00000543555 BICDL2A1A5D9 508 aa15.57■□□□□ 0.08
MSH2-206ENST00000543555 EEF2P13639 858 aaKnown RBP15.57■□□□□ 0.08
MSH2-206ENST00000543555 ERCC6LQ2NKX8 1250 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms