RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 PSTPIP2Q9H939 334 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 A1CFQ9NQ94 594 aaKnown RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 CYP39A1Q9NYL5 469 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 ORC3Q9UBD5 711 aaPredicted RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 ADD3Q9UEY8 706 aaKnown RBP7.27□□□□□ -1.25
LTBR-212ENST00000543542 ZNF236Q9UL36 1845 aa7.27□□□□□ -1.25
LTBR-212ENST00000543542 SMCO2A6NFE2 343 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 SPDYE3A6NKU9 549 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 STXBP3O00186 592 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 DTNBO60941 627 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 COBLO75128 1261 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 CNGA1P29973 690 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 HOXA13P31271 388 aaPredicted RBP7.26□□□□□ -1.25
LTBR-212ENST00000543542 NLRP5P59047 1200 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 RPS6P62753 249 aaKnown RBP7.26□□□□□ -1.25
LTBR-212ENST00000543542 CNTN2Q02246 1040 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 FUT2Q10981 343 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 IRF5Q13568 498 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 NTRK3Q16288 839 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
LTBR-212ENST00000543542 ARHGEF16Q5VV41 709 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 PPP1R18Q6NYC8 613 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 TNS4Q8IZW8 715 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 RGS22Q8NE09 1264 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 SH3TC2Q8TF17 1288 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 CLEC4DQ8WXI8 215 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 TBC1D5Q92609 795 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 TMX3Q96JJ7 454 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 MAML3Q96JK9 1138 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 GLT8D2Q9H1C3 349 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 EHMT1Q9H9B1 1298 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 C6orf50Q9HD87 102 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 BARHL2Q9NY43 387 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 VPS54Q9P1Q0 977 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 GJD2Q9UKL4 321 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 KIF3AQ9Y496 699 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 SMCHD1A6NHR9 2005 aa7.26□□□□□ -1.25
LTBR-212ENST00000543542 DOCK3Q8IZD9 2030 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 ASB14A6NK59 587 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 JAK2O60674 1132 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 CD2BP2O95400 341 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 HMGCRP04035 888 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 INHAP05111 366 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 MYCLP12524 364 aaPredicted RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 XRCC5P13010 732 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 EIF2AK2P19525 551 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 GNA11P29992 359 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 ALDH5A1P51649 535 aaPredicted RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 HMGN5P82970 282 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 PDE4DQ08499 809 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 GNL2Q13823 731 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 CCL14Q16627 93 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 UBE2SQ16763 222 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 ZNF792Q3KQV3 632 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 USP17L6PQ6QN14 398 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 SAMD3Q8N6K7 520 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 NSUN7Q8NE18 718 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 BICD2Q8TD16 824 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 PXYLP1Q8TE99 480 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 TRIB2Q92519 343 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 USP6NLQ92738 828 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 PURBQ96QR8 312 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 TAAR1Q96RJ0 339 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 RMDN3Q96TC7 470 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 LLPHQ9BRT6 129 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 TINF2Q9BSI4 451 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 BRMS1Q9HCU9 246 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 MAP3K20Q9NYL2 800 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 ZHX1Q9UKY1 873 aaPredicted RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 SMC3Q9UQE7 1217 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 CNPY2Q9Y2B0 182 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 DIS3Q9Y2L1 958 aaKnown RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.25□□□□□ -1.25
LTBR-212ENST00000543542 STK36Q9NRP7 1315 aa7.25□□□□□ -1.25
LTBR-212ENST00000543542 DNAJC25-GNG10A0A024R161 153 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 SOWAHBA6NEL2 793 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 K7ELQ4 463 aaPredicted RBP7.24□□□□□ -1.25
LTBR-212ENST00000543542 CTDNEP1O95476 244 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 HOXC6P09630 235 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 PRKAR2AP13861 404 aaKnown RBP7.24□□□□□ -1.25
LTBR-212ENST00000543542 CYP2C19P33261 490 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 HSD17B4P51659 736 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 SAFBQ15424 915 aaKnown RBP eCLIP7.24□□□□□ -1.25
LTBR-212ENST00000543542 PKN1Q16512 942 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 JAKMIP3Q5VZ66 844 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 OLFML2BQ68BL8 750 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.24□□□□□ -1.25
LTBR-212ENST00000543542 ARMCX2Q7L311 632 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 EEPD1Q7L9B9 569 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 ZNF467Q7Z7K2 595 aaPredicted RBP7.24□□□□□ -1.25
LTBR-212ENST00000543542 FAM133AQ8N9E0 248 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 DNERQ8NFT8 737 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 SYTL5Q8TDW5 730 aaPredicted RBP7.24□□□□□ -1.25
LTBR-212ENST00000543542 NSUN6Q8TEA1 469 aaKnown RBP7.24□□□□□ -1.25
LTBR-212ENST00000543542 AIFM3Q96NN9 605 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 TMEM106CQ9BVX2 250 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 MAF1Q9H063 256 aa7.24□□□□□ -1.25
LTBR-212ENST00000543542 HMX1Q9NP08 348 aaPredicted RBP7.24□□□□□ -1.25
LTBR-212ENST00000543542 RIC8AQ9NPQ8 531 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms