RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 SWAP70Q9UH65 585 aa20.86■□□□□ 0.93
COPS7A-215ENST00000543155 SRGNP10124 158 aa20.85■□□□□ 0.93
COPS7A-215ENST00000543155 TXKP42681 527 aa20.85■□□□□ 0.93
COPS7A-215ENST00000543155 TMEM266Q2M3C6 531 aa20.85■□□□□ 0.93
COPS7A-215ENST00000543155 SLC35F6Q8N357 371 aa20.85■□□□□ 0.93
COPS7A-215ENST00000543155 SLF1Q9BQI6 1058 aa20.85■□□□□ 0.93
COPS7A-215ENST00000543155 TUBGCP2Q9BSJ2 902 aa20.85■□□□□ 0.93
COPS7A-215ENST00000543155 STK17AQ9UEE5 414 aa20.85■□□□□ 0.93
COPS7A-215ENST00000543155 GREB1LQ9C091 1923 aaPredicted RBP20.85■□□□□ 0.93
COPS7A-215ENST00000543155 RIMBP2O15034 1052 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 ATP8B1O43520 1251 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 NDUFA10O95299 355 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 STK4Q13043 487 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 TSR1Q2NL82 804 aaKnown RBP20.84■□□□□ 0.93
COPS7A-215ENST00000543155 KIF4BQ2VIQ3 1234 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 COA7Q96BR5 231 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 ATP6V0A2Q9Y487 856 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 EPN1Q9Y6I3 576 aaPredicted RBP20.84■□□□□ 0.93
COPS7A-215ENST00000543155 B4DLN1 442 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 TTLL1O95922 423 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 CHMP4BP1P59074 171 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 GRB10Q13322 594 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 ANKRD40Q6AI12 368 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 SV2BQ7L1I2 683 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 CNOT6LQ96LI5 555 aaKnown RBP20.84■□□□□ 0.93
COPS7A-215ENST00000543155 CHP1Q99653 195 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 NAPGQ99747 312 aaPredicted RBP20.84■□□□□ 0.93
COPS7A-215ENST00000543155 NUP58Q9BVL2 599 aa20.84■□□□□ 0.93
COPS7A-215ENST00000543155 ADAMTSL1Q8N6G6 1762 aa20.83■□□□□ 0.93
COPS7A-215ENST00000543155 RAB34Q9BZG1 259 aa20.83■□□□□ 0.93
COPS7A-215ENST00000543155 EPC1Q9H2F5 836 aa20.83■□□□□ 0.93
COPS7A-215ENST00000543155 GPCPD1Q9NPB8 672 aa20.83■□□□□ 0.93
COPS7A-215ENST00000543155 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.93
COPS7A-215ENST00000543155 SERPINB13Q9UIV8 391 aa20.83■□□□□ 0.93
COPS7A-215ENST00000543155 F8W031 263 aaPredicted RBP20.83■□□□□ 0.92
COPS7A-215ENST00000543155 FCER1AP12319 257 aa20.83■□□□□ 0.92
COPS7A-215ENST00000543155 EIF6P56537 245 aaKnown RBP20.83■□□□□ 0.92
COPS7A-215ENST00000543155 ZNF543Q08ER8 600 aa20.83■□□□□ 0.92
COPS7A-215ENST00000543155 RETREG2Q8NC44 543 aa20.83■□□□□ 0.92
COPS7A-215ENST00000543155 TRPC5Q9UL62 973 aaPredicted RBP20.83■□□□□ 0.92
COPS7A-215ENST00000543155 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 PNMA6FA0A0J9YX94 578 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 SLC37A4O43826 429 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 TUBB4BP68371 445 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 CC2D1AQ6P1N0 951 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-215ENST00000543155 CERS5Q8N5B7 392 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 CDK5RAP3Q96JB5 506 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 PARD6BQ9BYG5 372 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 RIC8AQ9NPQ8 531 aa20.82■□□□□ 0.92
COPS7A-215ENST00000543155 TDP2O95551 362 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 KIAA0895Q8NCT3 520 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 PNMA5Q96PV4 448 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 TTYH3Q9C0H2 523 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 JMJD4Q9H9V9 463 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 BLOC1S4Q9NUP1 217 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 REXO2Q9Y3B8 237 aaKnown RBP20.81■□□□□ 0.92
COPS7A-215ENST00000543155 PVALEFA0A1B0GWK0 134 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 SEC31AO94979 1220 aaKnown RBP20.81■□□□□ 0.92
COPS7A-215ENST00000543155 ABL1P00519 1130 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 MTIF2P46199 727 aaKnown RBP20.81■□□□□ 0.92
COPS7A-215ENST00000543155 PDIA5Q14554 519 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 MEA1Q16626 185 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 UNC13DQ70J99 1090 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 CLEC10AQ8IUN9 316 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 LARP4BQ92615 738 aaKnown RBP20.81■□□□□ 0.92
COPS7A-215ENST00000543155 ZC3H12CQ9C0D7 883 aaKnown RBP20.81■□□□□ 0.92
COPS7A-215ENST00000543155 USP40Q9NVE5 1235 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 NRXN2Q9P2S2 1712 aa20.81■□□□□ 0.92
COPS7A-215ENST00000543155 POTEB2H3BUK9 544 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 HOXA7P31268 230 aaPredicted RBP20.8■□□□□ 0.92
COPS7A-215ENST00000543155 SHMT1P34896 483 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 TBC1D8BQ0IIM8 1120 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 WHAMMP3Q1A5X7 153 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 WDR59Q6PJI9 974 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 ZSCAN29Q8IWY8 852 aaPredicted RBP20.8■□□□□ 0.92
COPS7A-215ENST00000543155 ADGRF4Q8IZF3 695 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 EDIL3O43854 480 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 TRIM21P19474 475 aaKnown RBP20.8■□□□□ 0.92
COPS7A-215ENST00000543155 PLA2G4AP47712 749 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 PPP4R3AQ6IN85 833 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 NOC4LQ9BVI4 516 aaKnown RBP20.8■□□□□ 0.92
COPS7A-215ENST00000543155 HAUS4Q9H6D7 363 aa20.8■□□□□ 0.92
COPS7A-215ENST00000543155 PUF60Q9UHX1 559 aaKnown RBP20.8■□□□□ 0.92
COPS7A-215ENST00000543155 MYMKA6NI61 221 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 HLA-DOAP06340 250 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 TNNI2P48788 182 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 MCM6Q14566 821 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 TERF2Q15554 542 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 MIIPQ5JXC2 388 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 GPATCH4Q5T3I0 446 aaKnown RBP20.79■□□□□ 0.92
COPS7A-215ENST00000543155 CENPPQ6IPU0 288 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 RAD54LQ92698 747 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 CUL5Q93034 780 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 IQCDQ96DY2 449 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 LRRC27Q9C0I9 530 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 ZSWIM4Q9H7M6 989 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 ARFGAP3Q9NP61 516 aa20.79■□□□□ 0.92
COPS7A-215ENST00000543155 ZNHIT6Q9NWK9 470 aaKnown RBP20.79■□□□□ 0.92
COPS7A-215ENST00000543155 CLK2P49760 499 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms