RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 CEP120Q8N960 986 aa5.91□□□□□ -1.46
KDM3B-209ENST00000542866 AENQ8WTP8 325 aaKnown RBP5.91□□□□□ -1.46
KDM3B-209ENST00000542866 CABS1Q96KC9 395 aa5.91□□□□□ -1.46
KDM3B-209ENST00000542866 CAMKK2Q96RR4 588 aa5.91□□□□□ -1.46
KDM3B-209ENST00000542866 ZC3H12CQ9C0D7 883 aaKnown RBP5.91□□□□□ -1.46
KDM3B-209ENST00000542866 MLXIPQ9HAP2 919 aa5.91□□□□□ -1.46
KDM3B-209ENST00000542866 RMND1Q9NWS8 449 aa5.91□□□□□ -1.46
KDM3B-209ENST00000542866 CAPN11Q9UMQ6 739 aa5.91□□□□□ -1.46
KDM3B-209ENST00000542866 GRIN2DO15399 1336 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 AFDNP55196 1824 aaKnown RBP5.9□□□□□ -1.46
KDM3B-209ENST00000542866 LGALS16A8MUM7 142 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 PLEKHA8P1O95397 391 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 NLRP5P59047 1200 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 GUCY1A3Q02108 690 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 TTMPQ5BVD1 217 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 TYW1BQ6NUM6 668 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 NFRKBQ6P4R8 1299 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 SPATA4Q8NEY3 305 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 TTLL11Q8NHH1 800 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 DNAJC7Q99615 494 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 MTRQ99707 1265 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 CD248Q9HCU0 757 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 ABCF2Q9UG63 623 aa5.9□□□□□ -1.46
KDM3B-209ENST00000542866 TNKSO95271 1327 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 MARF1Q9Y4F3 1742 aaKnown RBP5.9□□□□□ -1.47
KDM3B-209ENST00000542866 GSG1L2A8MUP6 293 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 NCK2O43639 380 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 BMP15O95972 392 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 SSBP05455 408 aaKnown RBP eCLIP5.9□□□□□ -1.47
KDM3B-209ENST00000542866 PLEKP08567 350 aaPredicted RBP5.9□□□□□ -1.47
KDM3B-209ENST00000542866 GUCY2FP51841 1108 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 EPHB4P54760 987 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 RNASE9P60153 205 aaKnown RBP5.9□□□□□ -1.47
KDM3B-209ENST00000542866 ATP2B2Q01814 1243 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 APBA1Q02410 837 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 CFAP58Q5T655 872 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 C8orf74Q6P047 294 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 IRF2BP1Q8IU81 584 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 LCORLQ8N3X6 602 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 UPF1Q92900 1129 aaKnown RBP eCLIP5.9□□□□□ -1.471e-11■■■■■ 49.1
KDM3B-209ENST00000542866 SHISA4Q96DD7 197 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 CCDC43Q96MW1 224 aaKnown RBP5.9□□□□□ -1.47
KDM3B-209ENST00000542866 ZIM3Q96PE6 472 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 TUBGCP2Q9BSJ2 902 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 BCS1LQ9Y276 419 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 RIPOR2Q9Y4F9 1068 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 GLI3P10071 1580 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 C4AP0C0L4 1744 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 C4BP0C0L5 1744 aa5.9□□□□□ -1.47
KDM3B-209ENST00000542866 ESYT3A0FGR9 886 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 ANO9A1A5B4 782 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 AKR1B10O60218 316 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 CCDC172P0C7W6 258 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 ERCC3P19447 782 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 DNM2P50570 870 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 SEC24CP53992 1094 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 IFT88Q13099 833 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 PRR5LQ6MZQ0 368 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 DPP8Q6V1X1 898 aaPredicted RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 MICALCLQ6ZW33 695 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 CREG2Q8IUH2 290 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 CSGALNACT2Q8N6G5 542 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 BRIP1Q9BX63 1249 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 RNF26Q9BY78 433 aaPredicted RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 IFIH1Q9BYX4 1025 aaKnown RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 MTFR1LQ9H019 292 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 EXOC1Q9NV70 894 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 LRP2BPQ9P2M1 347 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 SNX12Q9UMY4 172 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 IQSEC3Q9UPP2 1182 aaPredicted RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 CAPN6Q9Y6Q1 641 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 C5P01031 1676 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 SMIM22K7EJ46 135 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 PSMA7O14818 248 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 MEFVO15553 781 aaPredicted RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 ATP2C2O75185 946 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 BBOX1O75936 387 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 UFL1O94874 794 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 UQCRFS1P1P0C7P4 283 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 HPDP32754 393 aaPredicted RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 VAV2P52735 878 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 ALX1Q15699 326 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 PKN1Q16512 942 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 PDXDC2PQ6P474 469 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 MAATS1Q7Z4T9 603 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 CATIPQ7Z7H3 387 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 MMGT1Q8N4V1 131 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 SPATA5Q8NB90 893 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 TRIM58Q8NG06 486 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 SDR42E1Q8WUS8 393 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 FAM212AQ96EL1 285 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 RNPC3Q96LT9 517 aaKnown RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 EYA3Q99504 573 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 SH3GL2Q99962 352 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 PHF20Q9BVI0 1012 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 NOC4LQ9BVI4 516 aaKnown RBP5.89□□□□□ -1.47
KDM3B-209ENST00000542866 STIM2Q9P246 746 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 NFU1Q9UMS0 254 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 ABCA3Q99758 1704 aa5.89□□□□□ -1.47
KDM3B-209ENST00000542866 TCRBV5S4A2TA0A5A2 114 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms