RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 FAM221BA6H8Z2 402 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 NOTOA8MTQ0 251 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 HRKO00198 91 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 TBX1O43435 398 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 CPP00450 1065 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 PRKCAP17252 672 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 PAMP19021 973 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 ECI1P42126 302 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 CORO7P57737 925 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 CYP4F8P98187 520 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 MESP2Q0VG99 397 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 SYDE1Q6ZW31 735 aaPredicted RBP4.83□□□□□ -1.64
USP28-210ENST00000542033 DPH6Q7L8W6 267 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 SIRT2Q8IXJ6 389 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 SHISA4Q96DD7 197 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 IPO9Q96P70 1041 aaKnown RBP4.83□□□□□ -1.64
USP28-210ENST00000542033 JMJD8Q96S16 334 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 AARSD1Q9BTE6 412 aaKnown RBP4.83□□□□□ -1.64
USP28-210ENST00000542033 SPATA9Q9BWV2 254 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 ACSL6Q9UKU0 697 aa4.83□□□□□ -1.64
USP28-210ENST00000542033 KDM2BQ8NHM5 1336 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 TRAV20A0A0B4J274 112 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 NPHP3-ACAD11A0A0J9YXS1 232 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 NFIBO00712 420 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 ABLIM1O14639 778 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 PEX10O60683 326 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 SEMA7AO75326 666 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 MPOP05164 745 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 C8AP07357 584 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 TMEM253P0C7T8 217 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 L1CAMP32004 1257 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 ERVFRD-1P60508 538 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 ZNF605Q86T29 641 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 TMEM52Q8NDY8 209 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 COPS5Q92905 334 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 CDC6Q99741 560 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 PLCD4Q9BRC7 762 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 IER2Q9BTL4 223 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 GPRC5CQ9NQ84 441 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 IMPACTQ9P2X3 320 aa4.82□□□□□ -1.64
USP28-210ENST00000542033 PRODHO43272 600 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 DIAPH1O60610 1272 aaKnown RBP4.81□□□□□ -1.64
USP28-210ENST00000542033 TSPAN15O95858 294 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 THBDP07204 575 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 PLS3P13797 630 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 RAP1GAPP47736 663 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 GALK1P51570 392 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 GFRA1P56159 465 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 TMEM132EQ6IEE7 984 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 NSMFQ6X4W1 530 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 KCTD13Q8WZ19 329 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 ZNF552Q9H707 407 aaPredicted RBP4.81□□□□□ -1.64
USP28-210ENST00000542033 PDLIM7Q9NR12 457 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 ARHGEF4Q9NR80 690 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 CLEC1BQ9P126 229 aa4.81□□□□□ -1.64
USP28-210ENST00000542033 TCAF2A6NFQ2 919 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 MEFVO15553 781 aaPredicted RBP4.8□□□□□ -1.64
USP28-210ENST00000542033 SCG5P05408 212 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 FGFR1P11362 822 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 GLDCP23378 1020 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 GRIA2P42262 883 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 MAP4K2Q12851 820 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 NR1I3Q14994 352 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 SF1Q15637 639 aaKnown RBP4.8□□□□□ -1.64
USP28-210ENST00000542033 PRSS53Q2L4Q9 553 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 IQCEQ6IPM2 695 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 CABP7Q86V35 215 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 CPNE8Q86YQ8 564 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 PPIL6Q8IXY8 311 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 ZBTB38Q8NAP3 1195 aaPredicted RBP4.8□□□□□ -1.64
USP28-210ENST00000542033 TMEM145Q8NBT3 493 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 NLGN2Q8NFZ4 835 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 KCNN1Q92952 543 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 TNFRSF12AQ9NP84 129 aa4.8□□□□□ -1.64
USP28-210ENST00000542033 TEX51A0A1B0GUA7 166 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 MYO1BO43795 1136 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 NPHS1O60500 1241 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 EFEMP2O95967 443 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 PABPC1P11940 636 aaKnown RBP4.79□□□□□ -1.64
USP28-210ENST00000542033 CEBPAP49715 358 aaPredicted RBP4.79□□□□□ -1.64
USP28-210ENST00000542033 KCNAB2Q13303 367 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 RAB3GAP1Q15042 981 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 ZC3H12BQ5HYM0 836 aaKnown RBP4.79□□□□□ -1.64
USP28-210ENST00000542033 ACBD5Q5T8D3 534 aaPredicted RBP4.79□□□□□ -1.64
USP28-210ENST00000542033 E4F1Q66K89 784 aaPredicted RBP4.79□□□□□ -1.64
USP28-210ENST00000542033 ANKLE2Q86XL3 938 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 SCUBE1Q8IWY4 988 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 NPLOC4Q8TAT6 608 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 THAP3Q8WTV1 239 aaPredicted RBP4.79□□□□□ -1.64
USP28-210ENST00000542033 FRS2Q8WU20 508 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 DIO2Q92813 273 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 MMP19Q99542 508 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 PIF1Q9H611 641 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 SIRT5Q9NXA8 310 aa4.79□□□□□ -1.64
USP28-210ENST00000542033 TRBV23-1A0A0A0MS06 115 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 DBX1A6NMT0 343 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 SRGAP3O43295 1099 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 ADCY3O60266 1144 aa4.78□□□□□ -1.64
USP28-210ENST00000542033 DLX3O60479 287 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms