RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 CDC23Q9UJX2 597 aa14.86□□□□□ -0.03
PRKAB1-206ENST00000541640 FRMPD2Q68DX3 1309 aaPredicted RBP14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 GREB1LQ9C091 1923 aaPredicted RBP14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 ATP8B1O43520 1251 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 PNMA6AP0CW24 399 aaPredicted RBP14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 SRGNP10124 158 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 AKR1B1P15121 316 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 ASIC1P78348 528 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 PICALMQ13492 652 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 TEX35Q5T0J7 233 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 PPP1R18Q6NYC8 613 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 FAM114A1Q8IWE2 563 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 STK17AQ9UEE5 414 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 SWAP70Q9UH65 585 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 LUC7L2Q9Y383 392 aaKnown RBP14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
PRKAB1-206ENST00000541640 CTAGE9A4FU28 777 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 STK4Q13043 487 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 CNNM4Q6P4Q7 775 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 SRGAP1Q7Z6B7 1085 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 CEP112Q8N8E3 955 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 TUBGCP2Q9BSJ2 902 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 DDX4Q9NQI0 724 aaKnown RBP14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 EDIL3O43854 480 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 NDUFA10O95299 355 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 TTLL1O95922 423 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 CALCRLQ16602 461 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 ANKRD40Q6AI12 368 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 DPP8Q6V1X1 898 aaPredicted RBP14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 LRRC47Q8N1G4 583 aaKnown RBP14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 SLC35F6Q8N357 371 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 RETREG2Q8NC44 543 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 COA7Q96BR5 231 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 CHP1Q99653 195 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 NUP58Q9BVL2 599 aa14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 EPN1Q9Y6I3 576 aaPredicted RBP14.84□□□□□ -0.03
PRKAB1-206ENST00000541640 TXKP42681 527 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 GRB10Q13322 594 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 PDIA5Q14554 519 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 TMEM266Q2M3C6 531 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 SV2BQ7L1I2 683 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 CERS5Q8N5B7 392 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 SLF1Q9BQI6 1058 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 TTYH3Q9C0H2 523 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 BLOC1S4Q9NUP1 217 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 LRWD1Q9UFC0 647 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 SERPINB13Q9UIV8 391 aa14.83□□□□□ -0.03
PRKAB1-206ENST00000541640 PNMA6FA0A0J9YX94 578 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 PVALEFA0A1B0GWK0 134 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 B4DLN1 442 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 RIMBP2O15034 1052 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 ABL1P00519 1130 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 FCER1AP12319 257 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 HOXA7P31268 230 aaPredicted RBP14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 CHMP4BP1P59074 171 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 TUBB4BP68371 445 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 ZNF543Q08ER8 600 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 MEA1Q16626 185 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 CNOT6LQ96LI5 555 aaKnown RBP14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 PNMA5Q96PV4 448 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 NAPGQ99747 312 aaPredicted RBP14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 EPC1Q9H2F5 836 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 RIC8AQ9NPQ8 531 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 REXO2Q9Y3B8 237 aaKnown RBP14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 NRXN2Q9P2S2 1712 aa14.83□□□□□ -0.04
PRKAB1-206ENST00000541640 SLC37A4O43826 429 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 HMGB2P26583 209 aaKnown RBP14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 KIF4BQ2VIQ3 1234 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 CC2D1AQ6P1N0 951 aaPredicted RBP14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 WDR59Q6PJI9 974 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 ZSCAN29Q8IWY8 852 aaPredicted RBP14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 KIAA0895Q8NCT3 520 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 PARD6BQ9BYG5 372 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 RAB34Q9BZG1 259 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 JMJD4Q9H9V9 463 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 MYH4Q9Y623 1939 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 PES1O00541 588 aaKnown RBP14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 TDP2O95551 362 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 SHMT1P34896 483 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 CLK2P49760 499 aaKnown RBP14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 TSR1Q2NL82 804 aaKnown RBP14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 CENPPQ6IPU0 288 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 ZNF662Q6ZS27 426 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 UNC13DQ70J99 1090 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 ADGRF4Q8IZF3 695 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 ZC3H12CQ9C0D7 883 aaKnown RBP14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 GPCPD1Q9NPB8 672 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 USP40Q9NVE5 1235 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 ADAMTSL1Q8N6G6 1762 aa14.82□□□□□ -0.04
PRKAB1-206ENST00000541640 F8W031 263 aaPredicted RBP14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 PLA2G4AP47712 749 aa14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 EIF6P56537 245 aaKnown RBP14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 MIIPQ5JXC2 388 aa14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 GPATCH4Q5T3I0 446 aaKnown RBP14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 PPP4R3AQ6IN85 833 aa14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 LARP4BQ92615 738 aaKnown RBP14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 ERGIC2Q96RQ1 377 aa14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 HAUS4Q9H6D7 363 aa14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 MYMKA6NI61 221 aa14.81□□□□□ -0.04
PRKAB1-206ENST00000541640 RASSF10A6NK89 507 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms