RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 KIF28PB7ZC32 967 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 KPNA6O60684 536 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 ICAM1P05362 532 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 MRPL12P52815 198 aaKnown RBP14.49□□□□□ -0.09
SNHG1-216ENST00000541416 RABGGTBP53611 331 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 PSMC6P62333 389 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 CCDC96Q2M329 555 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 RETREG2Q8NC44 543 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 MORC4Q8TE76 937 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 SLC9A7Q96T83 725 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 MTG1Q9BT17 334 aaPredicted RBP14.49□□□□□ -0.09
SNHG1-216ENST00000541416 WDR11Q9BZH6 1224 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 DCTPP1Q9H773 170 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 LRRC37A2A6NM11 1700 aa14.49□□□□□ -0.09
SNHG1-216ENST00000541416 NKRFO15226 690 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNHG1-216ENST00000541416 MUM1L1Q5H9M0 696 aa14.48□□□□□ -0.09
SNHG1-216ENST00000541416 TSHZ3Q63HK5 1081 aa14.48□□□□□ -0.09
SNHG1-216ENST00000541416 PHOSPHO2Q8TCD6 241 aa14.48□□□□□ -0.09
SNHG1-216ENST00000541416 CHMP4CQ96CF2 233 aa14.48□□□□□ -0.09
SNHG1-216ENST00000541416 SCLYQ96I15 445 aa14.48□□□□□ -0.09
SNHG1-216ENST00000541416 PTPDC1A2A3K4 754 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 PITPNM1O00562 1244 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 RANBP6O60518 1105 aaKnown RBP14.47□□□□□ -0.09
SNHG1-216ENST00000541416 MYL3P08590 195 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 ALDH5A1P51649 535 aaPredicted RBP14.47□□□□□ -0.09
SNHG1-216ENST00000541416 BFSP2Q13515 415 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 BAATQ14032 418 aaPredicted RBP14.47□□□□□ -0.09
SNHG1-216ENST00000541416 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 FAM47CQ5HY64 1035 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 MIER1Q8N108 512 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 OR6J1Q8NGC5 347 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 FAM122AQ96E09 287 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 RANBP17Q9H2T7 1088 aaKnown RBP14.47□□□□□ -0.09
SNHG1-216ENST00000541416 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
SNHG1-216ENST00000541416 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
SNHG1-216ENST00000541416 COG5Q9UP83 839 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 MTMR7Q9Y216 660 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 NOD1Q9Y239 953 aa14.47□□□□□ -0.09
SNHG1-216ENST00000541416 CA3P07451 260 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 CYP2C9P11712 490 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 POU3F3P20264 500 aaPredicted RBP14.46□□□□□ -0.09
SNHG1-216ENST00000541416 SNAP25P60880 206 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 PURAQ00577 322 aaKnown RBP14.46□□□□□ -0.09
SNHG1-216ENST00000541416 PTPN11Q06124 597 aaPredicted RBP14.46□□□□□ -0.09
SNHG1-216ENST00000541416 PDE4DQ08499 809 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 ZMYM1Q5SVZ6 1142 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 SYDE2Q5VT97 1194 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 NFRKBQ6P4R8 1299 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 DEFB128Q7Z7B8 93 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 CCDC155Q8N6L0 562 aa14.46□□□□□ -0.09
SNHG1-216ENST00000541416 SEC62Q99442 399 aaKnown RBP14.46□□□□□ -0.09
SNHG1-216ENST00000541416 FTOQ9C0B1 505 aaKnown RBP eCLIP14.46□□□□□ -0.09
SNHG1-216ENST00000541416 NCOR1O75376 2440 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 BDP1A6H8Y1 2624 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 BAIAP3O94812 1187 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 BMP1P13497 986 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 MYOGP15173 224 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 PLA2G5P39877 138 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 TTLL4Q14679 1199 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 BTNL9Q6UXG8 535 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 SCFD2Q8WU76 684 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 IL17RBQ9NRM6 502 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 TOMM22Q9NS69 142 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 ANAPC4Q9UJX5 808 aa14.45□□□□□ -0.1
SNHG1-216ENST00000541416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNHG1-216ENST00000541416 RBM47A0AV96 593 aaKnown RBP14.44□□□□□ -0.1
SNHG1-216ENST00000541416 ORC4O43929 436 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 NMT2O60551 498 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 TOP1P11387 765 aaKnown RBP14.44□□□□□ -0.1
SNHG1-216ENST00000541416 CALML3P27482 149 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 KCNJ6P48051 423 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 CTDSPL2Q05D32 466 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 RNF207Q6ZRF8 634 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 DNERQ8NFT8 737 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 MTCH2Q9Y6C9 303 aa14.44□□□□□ -0.1
SNHG1-216ENST00000541416 DDX49Q9Y6V7 483 aaKnown RBP14.44□□□□□ -0.1
SNHG1-216ENST00000541416 NFIBO00712 420 aa14.43□□□□□ -0.1
SNHG1-216ENST00000541416 PARNO95453 639 aaKnown RBP14.43□□□□□ -0.1
SNHG1-216ENST00000541416 IQCF3P0C7M6 154 aa14.43□□□□□ -0.1
SNHG1-216ENST00000541416 PTGS1P23219 599 aa14.43□□□□□ -0.1
SNHG1-216ENST00000541416 SLC16A2P36021 539 aa14.43□□□□□ -0.1
SNHG1-216ENST00000541416 NOVP48745 357 aa14.43□□□□□ -0.1
SNHG1-216ENST00000541416 TFF2Q03403 129 aa14.43□□□□□ -0.1
SNHG1-216ENST00000541416 NBPF20Q3BBV1 942 aa14.43□□□□□ -0.1
SNHG1-216ENST00000541416 PURBQ96QR8 312 aaKnown RBP14.43□□□□□ -0.1
SNHG1-216ENST00000541416 TCF20Q9UGU0 1960 aaKnown RBP14.42□□□□□ -0.1
SNHG1-216ENST00000541416 A6NJR5 290 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 TLL1O43897 1013 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 TXNP10599 105 aaKnown RBP14.42□□□□□ -0.1
SNHG1-216ENST00000541416 MX1P20591 662 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 TMEM63BQ5T3F8 832 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 C20orf194Q5TEA3 1177 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 DIEXFQ68CQ4 756 aaKnown RBP14.42□□□□□ -0.1
SNHG1-216ENST00000541416 HERC6Q8IVU3 1022 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 CAGE1Q8TC20 777 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 PI4K2BQ8TCG2 481 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 ARNTL2Q8WYA1 636 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 HLA-CQ95604 372 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 MAF1Q9H063 256 aa14.42□□□□□ -0.1
SNHG1-216ENST00000541416 GPCPD1Q9NPB8 672 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms