RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 IKQ13123 557 aaPredicted RBP14.07□□□□□ -0.16
COPA-205ENST00000541366 FAM47CQ5HY64 1035 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 HERC6Q8IVU3 1022 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 GMCL1P1Q8NEA9 526 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 OSBP2Q969R2 916 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 CYP39A1Q9NYL5 469 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
COPA-205ENST00000541366 TRIP12Q14669 1992 aaPredicted RBP14.06□□□□□ -0.16
COPA-205ENST00000541366 ACTN1P12814 892 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 MCCP23508 829 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 PURAQ00577 322 aaKnown RBP14.06□□□□□ -0.16
COPA-205ENST00000541366 NBPF20Q3BBV1 942 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 NSMFQ6X4W1 530 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 KCTD1Q719H9 257 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 ZNF444Q8N0Y2 327 aaPredicted RBP14.06□□□□□ -0.16
COPA-205ENST00000541366 GDPD5Q8WTR4 605 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 SLC9A7Q96T83 725 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 SEZ6LQ9BYH1 1024 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 FTOQ9C0B1 505 aaKnown RBP eCLIP14.06□□□□□ -0.16
COPA-205ENST00000541366 Q9Y3F1 56 aa14.06□□□□□ -0.16
COPA-205ENST00000541366 SCN10AQ9Y5Y9 1956 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 PI4K2BG5E9Z4 385 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 SMARCA5O60264 1052 aaPredicted RBP14.05□□□□□ -0.16
COPA-205ENST00000541366 IQCF3P0C7M6 154 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 STAT2P52630 851 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 DUSP28Q4G0W2 176 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 ZSCAN25Q6NSZ9 544 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 RPAP2Q8IXW5 612 aaPredicted RBP14.05□□□□□ -0.16
COPA-205ENST00000541366 STAG1Q8WVM7 1258 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 WDR11Q9BZH6 1224 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 VTA1Q9NP79 307 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 MTUS1Q9ULD2 1270 aa14.05□□□□□ -0.16
COPA-205ENST00000541366 RAB11FIP3O75154 756 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 SLC1A4P43007 532 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 TDO2P48775 406 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 TKFCQ3LXA3 575 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 GIMAP6Q6P9H5 292 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 PHOSPHO2Q8TCD6 241 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 MORC4Q8TE76 937 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 COPS5Q92905 334 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 POLR3EQ9NVU0 708 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 MTMR7Q9Y216 660 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 TANC1Q9C0D5 1861 aa14.04□□□□□ -0.16
COPA-205ENST00000541366 KIF28PB7ZC32 967 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 M0R2C6 588 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 GPAA1O43292 621 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 APPP05067 770 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 TSPY3P0CV98 308 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 TSPY8P0CW00 308 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 FDX1P10109 184 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 CHMP4BP1P59074 171 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 TFAP4Q01664 338 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 BAATQ14032 418 aaPredicted RBP14.03□□□□□ -0.16
COPA-205ENST00000541366 GPNMBQ14956 572 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 TCTN1Q2MV58 587 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 FAM160B2Q86V87 743 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 OR6J1Q8NGC5 347 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 CHURC1Q8WUH1 139 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 MTG1Q9BT17 334 aaPredicted RBP14.03□□□□□ -0.16
COPA-205ENST00000541366 PRR12Q9ULL5 1215 aa14.03□□□□□ -0.16
COPA-205ENST00000541366 PLIN4Q96Q06 1357 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 NFIBO00712 420 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 RFC2P35250 354 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 ALDH5A1P51649 535 aaPredicted RBP14.02□□□□□ -0.17
COPA-205ENST00000541366 DEFB103AP81534 67 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 TSHZ3Q63HK5 1081 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 RETREG2Q8NC44 543 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 GMCL1Q96IK5 515 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 UIMC1Q96RL1 719 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 UBE2ZQ9H832 354 aaPredicted RBP14.02□□□□□ -0.17
COPA-205ENST00000541366 INCENPQ9NQS7 918 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.17
COPA-205ENST00000541366 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 SYNPO2Q9UMS6 1093 aa14.02□□□□□ -0.17
COPA-205ENST00000541366 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 NMT2O60551 498 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 HMMRO75330 724 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 IL9P15248 144 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 CPT1AP50416 773 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 WDR5P61964 334 aaKnown RBP14.01□□□□□ -0.17
COPA-205ENST00000541366 FAM178BQ8IXR5 827 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 IFNL3Q8IZI9 196 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 GJD3Q8N144 294 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
COPA-205ENST00000541366 APPBP2Q92624 585 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 SEC62Q99442 399 aaKnown RBP14.01□□□□□ -0.17
COPA-205ENST00000541366 SUGCTQ9HAC7 445 aa14.01□□□□□ -0.17
COPA-205ENST00000541366 RBM47A0AV96 593 aaKnown RBP14□□□□□ -0.17
COPA-205ENST00000541366 CCER2I3L3R5 266 aa14□□□□□ -0.17
COPA-205ENST00000541366 RNF113AO15541 343 aaKnown RBP14□□□□□ -0.17
COPA-205ENST00000541366 KCNA5P22460 613 aa14□□□□□ -0.17
COPA-205ENST00000541366 SLC16A2P36021 539 aa14□□□□□ -0.17
COPA-205ENST00000541366 KCNJ6P48051 423 aa14□□□□□ -0.17
COPA-205ENST00000541366 MRE11P49959 708 aa14□□□□□ -0.17
COPA-205ENST00000541366 TTBK2Q6IQ55 1244 aa14□□□□□ -0.17
COPA-205ENST00000541366 RCSD1Q6JBY9 416 aa14□□□□□ -0.17
COPA-205ENST00000541366 SLC30A10Q6XR72 485 aa14□□□□□ -0.17
COPA-205ENST00000541366 KBTBD3Q8NAB2 608 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms