RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 PLXNA1Q9UIW2 1896 aa26.95■■□□□ 1.91
TMEM260-202ENST00000538838 GCOM1H8Y6P7 765 aaPredicted RBP26.95■■□□□ 1.91
TMEM260-202ENST00000538838 POLR2MP0CAP2 368 aa26.95■■□□□ 1.91
TMEM260-202ENST00000538838 HSD17B4P51659 736 aa26.95■■□□□ 1.91
TMEM260-202ENST00000538838 NR5A1Q13285 461 aa26.95■■□□□ 1.91
TMEM260-202ENST00000538838 SAFBQ15424 915 aaKnown RBP eCLIP26.95■■□□□ 1.91
TMEM260-202ENST00000538838 RNF207Q6ZRF8 634 aa26.95■■□□□ 1.91
TMEM260-202ENST00000538838 REXO1Q8N1G1 1221 aaKnown RBP26.95■■□□□ 1.91
TMEM260-202ENST00000538838 RGS22Q8NE09 1264 aa26.95■■□□□ 1.91
TMEM260-202ENST00000538838 BRMS1Q9HCU9 246 aa26.95■■□□□ 1.91
TMEM260-202ENST00000538838 BIN2Q9UBW5 565 aaPredicted RBP26.95■■□□□ 1.91
TMEM260-202ENST00000538838 BTBD18B2RXH4 712 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 KIF28PB7ZC32 967 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 MAPK4P31152 587 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 RPS6P62753 249 aaKnown RBP26.94■■□□□ 1.9
TMEM260-202ENST00000538838 GHRHRQ02643 423 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 MCTP1Q6DN14 999 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 BICD2Q8TD16 824 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 GLT8D2Q9H1C3 349 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 DOCK3Q8IZD9 2030 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 M0R2N6 131 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 PIK3CDO00329 1044 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 CLK2P49760 499 aaKnown RBP26.94■■□□□ 1.9
TMEM260-202ENST00000538838 BAATQ14032 418 aaPredicted RBP26.94■■□□□ 1.9
TMEM260-202ENST00000538838 FOXD4L5Q5VV16 416 aaPredicted RBP26.94■■□□□ 1.9
TMEM260-202ENST00000538838 JAKMIP3Q5VZ66 844 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.94■■□□□ 1.9
TMEM260-202ENST00000538838 GPR142Q7Z601 462 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 ANKRD35Q8N283 1001 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 FOXD4L4Q8WXT5 416 aaPredicted RBP26.94■■□□□ 1.9
TMEM260-202ENST00000538838 MMP19Q99542 508 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 BEGAINQ9BUH8 593 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 CYP39A1Q9NYL5 469 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 TSKSQ9UJT2 592 aa26.94■■□□□ 1.9
TMEM260-202ENST00000538838 MYH7BA7E2Y1 1941 aa26.93■■□□□ 1.9
TMEM260-202ENST00000538838 NOM1Q5C9Z4 860 aaKnown RBP26.93■■□□□ 1.9
TMEM260-202ENST00000538838 FERMT3Q86UX7 667 aa26.93■■□□□ 1.9
TMEM260-202ENST00000538838 PGBD1Q96JS3 809 aa26.93■■□□□ 1.9
TMEM260-202ENST00000538838 COL20A1Q9P218 1284 aa26.93■■□□□ 1.9
TMEM260-202ENST00000538838 PCDHA6Q9UN73 950 aa26.93■■□□□ 1.9
TMEM260-202ENST00000538838 PCDHA8Q9Y5H6 950 aa26.93■■□□□ 1.9
TMEM260-202ENST00000538838 PFASO15067 1338 aa26.92■■□□□ 1.9
TMEM260-202ENST00000538838 FCER1AP12319 257 aa26.92■■□□□ 1.9
TMEM260-202ENST00000538838 CTGFP29279 349 aa26.92■■□□□ 1.9
TMEM260-202ENST00000538838 PLEKHH3Q7Z736 793 aa26.92■■□□□ 1.9
TMEM260-202ENST00000538838 FCHSD1Q86WN1 690 aa26.92■■□□□ 1.9
TMEM260-202ENST00000538838 TNFRSF25Q93038 417 aa26.92■■□□□ 1.9
TMEM260-202ENST00000538838 WBP1LQ9NX94 342 aa26.92■■□□□ 1.9
TMEM260-202ENST00000538838 LACTBP83111 547 aaPredicted RBP26.91■■□□□ 1.9
TMEM260-202ENST00000538838 GNL2Q13823 731 aaKnown RBP26.91■■□□□ 1.9
TMEM260-202ENST00000538838 KCTD2Q14681 263 aa26.91■■□□□ 1.9
TMEM260-202ENST00000538838 SYTL5Q8TDW5 730 aaPredicted RBP26.91■■□□□ 1.9
TMEM260-202ENST00000538838 PURBQ96QR8 312 aaKnown RBP26.91■■□□□ 1.9
TMEM260-202ENST00000538838 IVNS1ABPQ9Y6Y0 642 aa26.91■■□□□ 1.9
TMEM260-202ENST00000538838 GPR25O00155 361 aa26.9■■□□□ 1.9
TMEM260-202ENST00000538838 ZSCAN22P10073 491 aaPredicted RBP26.9■■□□□ 1.9
TMEM260-202ENST00000538838 SP3Q02447 781 aa26.9■■□□□ 1.9
TMEM260-202ENST00000538838 ARHGAP39Q9C0H5 1083 aa26.9■■□□□ 1.9
TMEM260-202ENST00000538838 FOXP1Q9H334 677 aaPredicted RBP26.9■■□□□ 1.9
TMEM260-202ENST00000538838 ZDHHC9Q9Y397 364 aa26.9■■□□□ 1.9
TMEM260-202ENST00000538838 FAM205CA6NFA0 338 aa26.9■■□□□ 1.9
TMEM260-202ENST00000538838 EARS2Q5JPH6 523 aaKnown RBP26.9■■□□□ 1.9
TMEM260-202ENST00000538838 SAMD3Q8N6K7 520 aa26.9■■□□□ 1.9
TMEM260-202ENST00000538838 MAP3K20Q9NYL2 800 aaKnown RBP26.9■■□□□ 1.9
TMEM260-202ENST00000538838 BRD1O95696 1058 aa26.89■■□□□ 1.9
TMEM260-202ENST00000538838 PGK2P07205 417 aa26.89■■□□□ 1.9
TMEM260-202ENST00000538838 PDIA4P13667 645 aaKnown RBP26.89■■□□□ 1.9
TMEM260-202ENST00000538838 PTPREP23469 700 aa26.89■■□□□ 1.9
TMEM260-202ENST00000538838 U2AF2P26368 475 aaKnown RBP eCLIP26.89■■□□□ 1.93e-6■■■■□ 23.8
TMEM260-202ENST00000538838 RESTQ13127 1097 aa26.89■■□□□ 1.9
TMEM260-202ENST00000538838 AP3B2Q13367 1082 aa26.89■■□□□ 1.9
TMEM260-202ENST00000538838 TEX2Q8IWB9 1127 aa26.89■■□□□ 1.9
TMEM260-202ENST00000538838 ANO3Q9BYT9 981 aa26.89■■□□□ 1.9
TMEM260-202ENST00000538838 LRRC37A2A6NM11 1700 aa26.89■■□□□ 1.89
TMEM260-202ENST00000538838 SPDYE3A6NKU9 549 aa26.88■■□□□ 1.89
TMEM260-202ENST00000538838 ADORA2AP29274 412 aa26.88■■□□□ 1.89
TMEM260-202ENST00000538838 CNTN2Q02246 1040 aa26.88■■□□□ 1.89
TMEM260-202ENST00000538838 GRB14Q14449 540 aa26.88■■□□□ 1.89
TMEM260-202ENST00000538838 NOSTRINQ8IVI9 506 aa26.88■■□□□ 1.89
TMEM260-202ENST00000538838 MAF1Q9H063 256 aa26.88■■□□□ 1.89
TMEM260-202ENST00000538838 CIZ1Q9ULV3 898 aaPredicted RBP26.88■■□□□ 1.89
TMEM260-202ENST00000538838 CCDC194A0A1B0GVG4 234 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 TNPO2O14787 897 aaKnown RBP26.87■■□□□ 1.89
TMEM260-202ENST00000538838 STRNO43815 780 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 PSMC4P43686 418 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 CAP1Q01518 475 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 PIK3AP1Q6ZUJ8 805 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 KRT25Q7Z3Z0 450 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 ABRAQ8N0Z2 381 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 TAAR1Q96RJ0 339 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 POTEB2H3BUK9 544 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 F13A1P00488 732 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 FCGRTP55899 365 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 NUCB2P80303 420 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 TRIM47Q96LD4 638 aa26.87■■□□□ 1.89
TMEM260-202ENST00000538838 DNAJC25-GNG10A0A024R161 153 aa26.86■■□□□ 1.89
TMEM260-202ENST00000538838 SLC15A5A6NIM6 579 aa26.86■■□□□ 1.89
TMEM260-202ENST00000538838 FOSP01100 380 aaPredicted RBP26.86■■□□□ 1.89
TMEM260-202ENST00000538838 JMYQ8N9B5 988 aa26.86■■□□□ 1.89
TMEM260-202ENST00000538838 CD99L2Q8TCZ2 262 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms