RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 RNF207Q6ZRF8 634 aa15.93■□□□□ 0.14
CD9-208ENST00000538834 PAWRQ96IZ0 340 aaKnown RBP15.93■□□□□ 0.14
CD9-208ENST00000538834 VAT1LQ9HCJ6 419 aa15.93■□□□□ 0.14
CD9-208ENST00000538834 COL20A1Q9P218 1284 aa15.93■□□□□ 0.14
CD9-208ENST00000538834 MRPL11Q9Y3B7 192 aaKnown RBP15.93■□□□□ 0.14
CD9-208ENST00000538834 SLC12A7Q9Y666 1083 aa15.93■□□□□ 0.14
CD9-208ENST00000538834 CCDC69A6NI79 296 aa15.92■□□□□ 0.14
CD9-208ENST00000538834 ADAMTS4O75173 837 aa15.92■□□□□ 0.14
CD9-208ENST00000538834 PLEKHA8P1O95397 391 aa15.92■□□□□ 0.14
CD9-208ENST00000538834 AKR1A1P14550 325 aa15.92■□□□□ 0.14
CD9-208ENST00000538834 USH1GQ495M9 461 aa15.92■□□□□ 0.14
CD9-208ENST00000538834 TMTC3Q6ZXV5 915 aa15.92■□□□□ 0.14
CD9-208ENST00000538834 KLHDC9Q8NEP7 349 aa15.92■□□□□ 0.14
CD9-208ENST00000538834 CTCFLQ8NI51 663 aaPredicted RBP15.92■□□□□ 0.14
CD9-208ENST00000538834 SYTL5Q8TDW5 730 aaPredicted RBP15.92■□□□□ 0.14
CD9-208ENST00000538834 JAKMIP1Q96N16 626 aaKnown RBP15.92■□□□□ 0.14
CD9-208ENST00000538834 UPF3AQ9H1J1 476 aaKnown RBP15.92■□□□□ 0.14
CD9-208ENST00000538834 SCN10AQ9Y5Y9 1956 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 DOCK5Q9H7D0 1870 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 DNM1LO00429 736 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 CTAGE5O15320 804 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 DUSP11O75319 330 aaKnown RBP15.91■□□□□ 0.14
CD9-208ENST00000538834 PPP2R5BQ15173 497 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 BLOC1S2Q6QNY1 142 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 RUFY3Q7L099 469 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 NECAB2Q7Z6G3 386 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 NUP133Q8WUM0 1156 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 ADD3Q9UEY8 706 aaKnown RBP15.91■□□□□ 0.14
CD9-208ENST00000538834 GNEQ9Y223 722 aaKnown RBP15.91■□□□□ 0.14
CD9-208ENST00000538834 CNPY2Q9Y2B0 182 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 PCDHA1Q9Y5I3 950 aa15.91■□□□□ 0.14
CD9-208ENST00000538834 DDX49Q9Y6V7 483 aaKnown RBP15.91■□□□□ 0.14
CD9-208ENST00000538834 SEC24BO95487 1268 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 RXRAP19793 462 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 PSMA5P28066 241 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 CST5P28325 142 aaPredicted RBP15.9■□□□□ 0.14
CD9-208ENST00000538834 CNGA1P29973 690 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 CDC27P30260 824 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 ANAPC15P60006 121 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 TRAF1Q13077 416 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 TOB2Q14106 344 aaPredicted RBP15.9■□□□□ 0.14
CD9-208ENST00000538834 LRRC41Q15345 812 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 CCDC144BQ3MJ40 725 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 Q6ZUG5 572 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 MCF2L2Q86YR7 1114 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 TAAR1Q96RJ0 339 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 ALDH8A1Q9H2A2 487 aaPredicted RBP15.9■□□□□ 0.14
CD9-208ENST00000538834 VTA1Q9NP79 307 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 FAM184BQ9ULE4 1060 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 FRMPD4Q14CM0 1322 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 CNTNAP5Q8WYK1 1306 aa15.9■□□□□ 0.14
CD9-208ENST00000538834 PTPDC1A2A3K4 754 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 GJA9P57773 515 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 SNX17Q15036 470 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 C8orf34Q49A92 452 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 IQSEC1Q6DN90 963 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 NFXL1Q6ZNB6 911 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 RBM28Q9NW13 759 aaKnown RBP15.89■□□□□ 0.13
CD9-208ENST00000538834 Q9Y3F1 56 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 LTBP2Q14767 1821 aa15.89■□□□□ 0.13
CD9-208ENST00000538834 WDR81Q562E7 1941 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 PIK3CDO00329 1044 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 ZBTB43O43298 467 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 DHX16O60231 1041 aaKnown RBP15.88■□□□□ 0.13
CD9-208ENST00000538834 CASTP20810 708 aaKnown RBP15.88■□□□□ 0.13
CD9-208ENST00000538834 CALML3P27482 149 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 NTRK3Q16288 839 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 C1orf53Q5VUE5 145 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 ANO1Q5XXA6 986 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 MICU3Q86XE3 530 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 CMTR1Q8N1G2 835 aaKnown RBP15.88■□□□□ 0.13
CD9-208ENST00000538834 BRF1Q92994 677 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 IWS1Q96ST2 819 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
CD9-208ENST00000538834 C11orf49Q9H6J7 331 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 PDGFCQ9NRA1 345 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 PHF24Q9UPV7 400 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 SYNRGQ9UMZ2 1314 aa15.88■□□□□ 0.13
CD9-208ENST00000538834 KLF18A0A0U1RQI7 1052 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.87■□□□□ 0.13
CD9-208ENST00000538834 MEIS2O14770 477 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 RARBP10826 455 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 APOBRQ0VD83 1088 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 TMEM63BQ5T3F8 832 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 HOMER1Q86YM7 354 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 RAB11FIP4Q86YS3 637 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 LENG1Q96BZ8 264 aaPredicted RBP15.87■□□□□ 0.13
CD9-208ENST00000538834 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
CD9-208ENST00000538834 HTATIP2Q9BUP3 242 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 XPNPEP3Q9NQH7 507 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 PXMP2Q9NR77 195 aa15.87■□□□□ 0.13
CD9-208ENST00000538834 RANBP2P49792 3224 aaKnown RBP15.86■□□□□ 0.13
CD9-208ENST00000538834 SMPD1P17405 629 aa15.86■□□□□ 0.13
CD9-208ENST00000538834 PDIA3P30101 505 aaKnown RBP15.86■□□□□ 0.13
CD9-208ENST00000538834 ADD1P35611 737 aaKnown RBP15.86■□□□□ 0.13
CD9-208ENST00000538834 ADCYAP1R1P41586 468 aa15.86■□□□□ 0.13
CD9-208ENST00000538834 RTN1Q16799 776 aa15.86■□□□□ 0.13
CD9-208ENST00000538834 GJC2Q5T442 439 aaPredicted RBP15.86■□□□□ 0.13
CD9-208ENST00000538834 PRPF38BQ5VTL8 546 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms