RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ANKRD40Q6AI12 368 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 ZNF713Q8N859 430 aaPredicted RBP27.9■■■□□ 2.06
RAB40C-204ENST00000538492 CHP1Q99653 195 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 B4DLN1 442 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 ZNF543Q08ER8 600 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 NFIAQ12857 509 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 ZNF507Q8TCN5 953 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 P2RX5Q93086 422 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 SLF1Q9BQI6 1058 aa27.9■■■□□ 2.06
RAB40C-204ENST00000538492 PPP1R11O60927 126 aaPredicted RBP27.89■■■□□ 2.06
RAB40C-204ENST00000538492 POTEMA6NI47 508 aa27.89■■■□□ 2.05
RAB40C-204ENST00000538492 AMPD3Q01432 767 aa27.89■■■□□ 2.05
RAB40C-204ENST00000538492 GRB10Q13322 594 aa27.89■■■□□ 2.05
RAB40C-204ENST00000538492 TEX35Q5T0J7 233 aa27.89■■■□□ 2.05
RAB40C-204ENST00000538492 KCTD1Q719H9 257 aa27.89■■■□□ 2.05
RAB40C-204ENST00000538492 CCDC96Q2M329 555 aa27.88■■■□□ 2.05
RAB40C-204ENST00000538492 TUBGCP2Q9BSJ2 902 aa27.88■■■□□ 2.05
RAB40C-204ENST00000538492 KCNQ5Q9NR82 932 aa27.88■■■□□ 2.05
RAB40C-204ENST00000538492 SWAP70Q9UH65 585 aa27.88■■■□□ 2.05
RAB40C-204ENST00000538492 CCNE1P24864 410 aa27.88■■■□□ 2.05
RAB40C-204ENST00000538492 ZSWIM4Q9H7M6 989 aa27.88■■■□□ 2.05
RAB40C-204ENST00000538492 PNMA6FA0A0J9YX94 578 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 SEMA3FQ13275 785 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 MCM6Q14566 821 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 APOBEC3HQ6NTF7 200 aaKnown RBP27.87■■■□□ 2.05
RAB40C-204ENST00000538492 ZFPM1Q8IX07 1006 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 TEKT1Q969V4 418 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 SLC39A2Q9NP94 309 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 BLOC1S4Q9NUP1 217 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 BRWD3Q6RI45 1802 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 RAD21O60216 631 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 NPR1P16066 1061 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 ORC2Q13416 577 aaPredicted RBP27.87■■■□□ 2.05
RAB40C-204ENST00000538492 SV2BQ7L1I2 683 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 KRT222Q8N1A0 295 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 KIAA0895Q8NCT3 520 aa27.87■■■□□ 2.05
RAB40C-204ENST00000538492 LUC7L2Q9Y383 392 aaKnown RBP27.87■■■□□ 2.05
RAB40C-204ENST00000538492 CACNB3P54284 484 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 CDK5RAP3Q96JB5 506 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 PNMA5Q96PV4 448 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 DBNDD1Q9H9R9 158 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 A0A1W2PQC6 194 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 BICDL2A1A5D9 508 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 TMEM266Q2M3C6 531 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 DYMQ7RTS9 669 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 SLC35F6Q8N357 371 aa27.86■■■□□ 2.05
RAB40C-204ENST00000538492 CNOT6LQ96LI5 555 aaKnown RBP27.86■■■□□ 2.05
RAB40C-204ENST00000538492 ARGLU1Q9NWB6 273 aaPredicted RBP27.86■■■□□ 2.05
RAB40C-204ENST00000538492 MYH4Q9Y623 1939 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 FAM196BA6NMK8 535 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 USP17L10C9JJH3 530 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 HLA-DOAP06340 250 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 FXR2P51116 673 aaKnown RBP eCLIP27.85■■■□□ 2.05
RAB40C-204ENST00000538492 COL23A1Q86Y22 540 aaPredicted RBP27.85■■■□□ 2.05
RAB40C-204ENST00000538492 OR8K1Q8NGG5 319 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 NOC3LQ8WTT2 800 aaKnown RBP27.85■■■□□ 2.05
RAB40C-204ENST00000538492 GJA10Q969M2 543 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 NUDT12Q9BQG2 462 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 PCDHAC2Q9Y5I4 1007 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 QSER1Q2KHR3 1735 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 MYMKA6NI61 221 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 KLK7P49862 253 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 DNM2P50570 870 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 RIC8AQ9NPQ8 531 aa27.85■■■□□ 2.05
RAB40C-204ENST00000538492 NKRFO15226 690 aaKnown RBP eCLIP27.84■■■□□ 2.05
RAB40C-204ENST00000538492 TCP10Q12799 353 aa27.84■■■□□ 2.05
RAB40C-204ENST00000538492 CNNM4Q6P4Q7 775 aa27.84■■■□□ 2.05
RAB40C-204ENST00000538492 KIF4BQ2VIQ3 1234 aa27.84■■■□□ 2.05
RAB40C-204ENST00000538492 RSRC2Q7L4I2 434 aaKnown RBP27.84■■■□□ 2.05
RAB40C-204ENST00000538492 NLGN1Q8N2Q7 840 aa27.84■■■□□ 2.05
RAB40C-204ENST00000538492 LARP4BQ92615 738 aaKnown RBP27.84■■■□□ 2.05
RAB40C-204ENST00000538492 EPN1Q9Y6I3 576 aaPredicted RBP27.84■■■□□ 2.05
RAB40C-204ENST00000538492 ARHGAP25P42331 645 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 MTIF2P46199 727 aaKnown RBP27.83■■■□□ 2.05
RAB40C-204ENST00000538492 SHROOM1Q2M3G4 852 aaPredicted RBP27.83■■■□□ 2.05
RAB40C-204ENST00000538492 HHIPL2Q6UWX4 724 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 SNX29Q8TEQ0 813 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 FAM53CQ9NYF3 392 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 CAPN11Q9UMQ6 739 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 NDUFA10O95299 355 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 ALDH1B1P30837 517 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 TBC1D8BQ0IIM8 1120 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 TMCO3Q6UWJ1 677 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 UIMC1Q96RL1 719 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 DNAJC7Q99615 494 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 AGPAT5Q9NUQ2 364 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 FHOD1Q9Y613 1164 aa27.83■■■□□ 2.05
RAB40C-204ENST00000538492 CRKP46108 304 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 KIAA0825Q8IV33 1275 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 SEMA6BQ9H3T3 888 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 PUF60Q9UHX1 559 aaKnown RBP27.82■■■□□ 2.04
RAB40C-204ENST00000538492 CTAGE9A4FU28 777 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 SEC31AO94979 1220 aaKnown RBP27.82■■■□□ 2.04
RAB40C-204ENST00000538492 TRIM21P19474 475 aaKnown RBP27.82■■■□□ 2.04
RAB40C-204ENST00000538492 BMS1Q14692 1282 aaKnown RBP27.82■■■□□ 2.04
RAB40C-204ENST00000538492 WDR59Q6PJI9 974 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 CUL5Q93034 780 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 RAB34Q9BZG1 259 aa27.82■■■□□ 2.04
RAB40C-204ENST00000538492 TMX4Q9H1E5 349 aaPredicted RBP27.82■■■□□ 2.04
RAB40C-204ENST00000538492 DNAJC18Q9H819 358 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms