RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 LEXMQ3ZCV2 418 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
CLPB-208ENST00000538021 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.3□□□□□ -0.28
CLPB-208ENST00000538021 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 FBXL18Q96ME1 805 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 PUS7LQ9H0K6 701 aaKnown RBP13.3□□□□□ -0.28
CLPB-208ENST00000538021 VTA1Q9NP79 307 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 MYH4Q9Y623 1939 aa13.3□□□□□ -0.28
CLPB-208ENST00000538021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.29□□□□□ -0.28
CLPB-208ENST00000538021 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 PRDM1O75626 825 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 TTLL1O95922 423 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 STAT2P52630 851 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 CHMP4BP1P59074 171 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 BFSP2Q13515 415 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 TKFCQ3LXA3 575 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 DUSP28Q4G0W2 176 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 NSMFQ6X4W1 530 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 ZNF444Q8N0Y2 327 aaPredicted RBP13.29□□□□□ -0.28
CLPB-208ENST00000538021 GMCL1P1Q8NEA9 526 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 MKL1Q969V6 931 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 PURBQ96QR8 312 aaKnown RBP13.29□□□□□ -0.28
CLPB-208ENST00000538021 WDR11Q9BZH6 1224 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 SUGCTQ9HAC7 445 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
CLPB-208ENST00000538021 IGKV6D-41A0A0C4DH26 115 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 SNAP25P60880 206 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
CLPB-208ENST00000538021 SBK1Q52WX2 424 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 BRDTQ58F21 947 aaPredicted RBP13.28□□□□□ -0.28
CLPB-208ENST00000538021 MUM1L1Q5H9M0 696 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
CLPB-208ENST00000538021 CHURC1Q8WUH1 139 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 TET1Q8NFU7 2136 aa13.28□□□□□ -0.28
CLPB-208ENST00000538021 DCXO43602 365 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 RLBP1P12271 317 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 DEFB103AP81534 67 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 ZSCAN25Q6NSZ9 544 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 NFRKBQ6P4R8 1299 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 FAM160B2Q86V87 743 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 STAG1Q8WVM7 1258 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 TGS1Q96RS0 853 aaKnown RBP13.27□□□□□ -0.29
CLPB-208ENST00000538021 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.29
CLPB-208ENST00000538021 GRXCR2A6NFK2 248 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 TSPY3P0CV98 308 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 TSPY8P0CW00 308 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 SLC1A4P43007 532 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 ERVK-21P61565 698 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 PTPRSQ13332 1948 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 FAM117BQ6P1L5 589 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 USP34Q70CQ2 3546 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 STRBPQ96SI9 672 aaKnown RBP13.26□□□□□ -0.29
CLPB-208ENST00000538021 RAD9AQ99638 391 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 HAUS7Q99871 368 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 KCNH6Q9H252 994 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 CCPG1Q9ULG6 757 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
CLPB-208ENST00000538021 RAD50Q92878 1312 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 LINC01553A4QN01 128 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 GSG1L2A8MUP6 293 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 H3BQ06 376 aaPredicted RBP13.25□□□□□ -0.29
CLPB-208ENST00000538021 GJB5O95377 273 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 ATP5JP18859 108 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 MCCP23508 829 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
CLPB-208ENST00000538021 PTPN11Q06124 597 aaPredicted RBP13.25□□□□□ -0.29
CLPB-208ENST00000538021 PTGISQ16647 500 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 LRRFIP1Q32MZ4 808 aaKnown RBP13.25□□□□□ -0.29
CLPB-208ENST00000538021 PUS10Q3MIT2 529 aaKnown RBP13.25□□□□□ -0.29
CLPB-208ENST00000538021 EP400NLQ6ZTU2 488 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 KCTD1Q719H9 257 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 CCDC155Q8N6L0 562 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
CLPB-208ENST00000538021 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
CLPB-208ENST00000538021 TRIP12Q14669 1992 aaPredicted RBP13.24□□□□□ -0.29
CLPB-208ENST00000538021 SCN10AQ9Y5Y9 1956 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 MYH7P12883 1935 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 KPNA6O60684 536 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 APPP05067 770 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 TDO2P48775 406 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 BAATQ14032 418 aaPredicted RBP13.24□□□□□ -0.29
CLPB-208ENST00000538021 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 CNKSR3Q6P9H4 555 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 AFAP1L1Q8TED9 768 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 ANKS1AQ92625 1134 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 COPS5Q92905 334 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 GMCL1Q96IK5 515 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 PRR12Q9ULL5 1215 aa13.24□□□□□ -0.29
CLPB-208ENST00000538021 POTEB3A0JP26 581 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 PTPDC1A2A3K4 754 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 SELPP16109 830 aa13.23□□□□□ -0.29
CLPB-208ENST00000538021 TFAP4Q01664 338 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms