RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 CTAGE5O15320 804 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 B4GALT4O60513 344 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 CALML3P27482 149 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 PBX2P40425 430 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 ALDH5A1P51649 535 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-203ENST00000537194 PPP2R5BQ15173 497 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 ALX1Q15699 326 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 CCDC85BQ15834 202 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-203ENST00000537194 CCDC178Q5BJE1 867 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 ANKRD45Q5TZF3 282 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 PPP2R2DQ66LE6 453 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 SCFD2Q8WU76 684 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 MTG1Q9BT17 334 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-203ENST00000537194 TRPV6Q9H1D0 765 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 ALDH8A1Q9H2A2 487 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-203ENST00000537194 RANBP17Q9H2T7 1088 aaKnown RBP10.51□□□□□ -0.73
SMAD3-203ENST00000537194 NKX2-4Q9H2Z4 354 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 RNF41Q9H4P4 317 aaPredicted RBP10.51□□□□□ -0.73
SMAD3-203ENST00000537194 GPCPD1Q9NPB8 672 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 PDGFCQ9NRA1 345 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMAD3-203ENST00000537194 PCDHA11Q9Y5I1 949 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 ASTN1O14525 1302 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 GBF1Q92538 1859 aa10.51□□□□□ -0.73
SMAD3-203ENST00000537194 PRUNE2Q8WUY3 3088 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 NMT2O60551 498 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 ATP2A2P16615 1042 aaKnown RBP10.5□□□□□ -0.73
SMAD3-203ENST00000537194 RFC2P35250 354 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 SLC16A2P36021 539 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 PSMC6P62333 389 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 BFSP2Q13515 415 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 SKIV2LQ15477 1246 aaKnown RBP10.5□□□□□ -0.73
SMAD3-203ENST00000537194 MCMDC2Q4G0Z9 681 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 TMEM67Q5HYA8 995 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 TAPT1Q6NXT6 567 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 BTNL9Q6UXG8 535 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 RNF207Q6ZRF8 634 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 MFSD6Q6ZSS7 791 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 MICALL1Q8N3F8 863 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 USP38Q8NB14 1042 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 DNERQ8NFT8 737 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 TTC14Q96N46 770 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 FTOQ9C0B1 505 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMAD3-203ENST00000537194 IL17RBQ9NRM6 502 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 TCP11L1Q9NUJ3 509 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 TNKSO95271 1327 aa10.5□□□□□ -0.73
SMAD3-203ENST00000537194 MYH6P13533 1939 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-203ENST00000537194 TRIM6-TRIM34B2RNG4 842 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 NT5C2P49902 561 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-203ENST00000537194 TTLL4Q14679 1199 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 GPATCH4Q5T3I0 446 aaKnown RBP10.49□□□□□ -0.73
SMAD3-203ENST00000537194 NFRKBQ6P4R8 1299 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 DEFB128Q7Z7B8 93 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 IQCA1Q86XH1 822 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 MORC4Q8TE76 937 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 ASB2Q96Q27 587 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 TMEM47Q9BQJ4 181 aa10.49□□□□□ -0.73
SMAD3-203ENST00000537194 CXXC1Q9P0U4 656 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-203ENST00000537194 FRMPD2Q68DX3 1309 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-203ENST00000537194 NFIBO00712 420 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 FGAP02671 866 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 TXNP10599 105 aaKnown RBP10.48□□□□□ -0.73
SMAD3-203ENST00000537194 CHMP4BP1P59074 171 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 PURAQ00577 322 aaKnown RBP10.48□□□□□ -0.73
SMAD3-203ENST00000537194 TTBK2Q6IQ55 1244 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 MCF2L2Q86YR7 1114 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 OTUD7AQ8TE49 926 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-203ENST00000537194 ESR2Q92731 530 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 SCLYQ96I15 445 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 SLC9A7Q96T83 725 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 UHRF1Q96T88 793 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-203ENST00000537194 MAF1Q9H063 256 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 INCENPQ9NQS7 918 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 UMODL1Q5DID0 1318 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 WDR19Q8NEZ3 1342 aa10.48□□□□□ -0.73
SMAD3-203ENST00000537194 PRRC2BQ5JSZ5 2229 aaKnown RBP10.48□□□□□ -0.73
SMAD3-203ENST00000537194 LRRC37A2A6NM11 1700 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 TCF20Q9UGU0 1960 aaKnown RBP10.47□□□□□ -0.73
SMAD3-203ENST00000537194 SCN10AQ9Y5Y9 1956 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 RBM47A0AV96 593 aaKnown RBP10.47□□□□□ -0.73
SMAD3-203ENST00000537194 PITPNM1O00562 1244 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 DHX16O60231 1041 aaKnown RBP10.47□□□□□ -0.73
SMAD3-203ENST00000537194 PARNO95453 639 aaKnown RBP10.47□□□□□ -0.73
SMAD3-203ENST00000537194 FGRP09769 529 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 PDHBP11177 359 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 CYP2C9P11712 490 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 KCNJ6P48051 423 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 NOVP48745 357 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 RABGGTBP53611 331 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 PDE1AP54750 535 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 RPS6P62753 249 aaKnown RBP10.47□□□□□ -0.73
SMAD3-203ENST00000537194 ZNF543Q08ER8 600 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 NBPF20Q3BBV1 942 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 VPS53Q5VIR6 699 aa10.47□□□□□ -0.73
SMAD3-203ENST00000537194 PHOSPHO2Q8TCD6 241 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms