RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 REXO1Q8N1G1 1221 aaKnown RBP18.61■□□□□ 0.57
VAMP1-205ENST00000535927 CLEC4DQ8WXI8 215 aa18.61■□□□□ 0.57
VAMP1-205ENST00000535927 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
VAMP1-205ENST00000535927 TSKSQ9UJT2 592 aa18.61■□□□□ 0.57
VAMP1-205ENST00000535927 GNRH1P01148 92 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 FCER1AP12319 257 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 ERCC3P19447 782 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 KIF22Q14807 665 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 KRT25Q7Z3Z0 450 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 NCAPG2Q86XI2 1143 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 AIFM3Q96NN9 605 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 SLC5A4Q9NY91 659 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 CHMP5Q9NZZ3 219 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 RIPK3Q9Y572 518 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 IVNS1ABPQ9Y6Y0 642 aa18.6■□□□□ 0.57
VAMP1-205ENST00000535927 PPFIA3O75145 1194 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 CLK2P49760 499 aaKnown RBP18.59■□□□□ 0.57
VAMP1-205ENST00000535927 GNL2Q13823 731 aaKnown RBP18.59■□□□□ 0.57
VAMP1-205ENST00000535927 KCTD2Q14681 263 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 ATL3Q6DD88 541 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 TYW1BQ6NUM6 668 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 SPRYD3Q8NCJ5 442 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 DNERQ8NFT8 737 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 MPHOSPH6Q99547 160 aaKnown RBP18.59■□□□□ 0.57
VAMP1-205ENST00000535927 NAP1L4Q99733 375 aaKnown RBP18.59■□□□□ 0.57
VAMP1-205ENST00000535927 CPA4Q9UI42 421 aa18.59■□□□□ 0.57
VAMP1-205ENST00000535927 DIS3Q9Y2L1 958 aaKnown RBP18.59■□□□□ 0.57
VAMP1-205ENST00000535927 SLC15A5A6NIM6 579 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 SPDYE3A6NKU9 549 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 M0R2N6 131 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 MEIS2O14770 477 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 TRPA1O75762 1119 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 ZSCAN22P10073 491 aaPredicted RBP18.58■□□□□ 0.56
VAMP1-205ENST00000535927 TRAPPC10P48553 1259 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 XRRA1Q6P2D8 792 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 PLEKHH3Q7Z736 793 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 DIS3L2Q8IYB7 885 aaKnown RBP18.58■□□□□ 0.56
VAMP1-205ENST00000535927 ANKRD35Q8N283 1001 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 ADD3Q9UEY8 706 aaKnown RBP18.58■□□□□ 0.56
VAMP1-205ENST00000535927 MTMR6Q9Y217 621 aa18.58■□□□□ 0.56
VAMP1-205ENST00000535927 ZNFX1Q9P2E3 1918 aaKnown RBP18.58■□□□□ 0.56
VAMP1-205ENST00000535927 OPLAHO14841 1288 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 BRD1O95696 1058 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 CFBP00751 764 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 SP3Q02447 781 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 NPY5RQ15761 445 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 MMP19Q99542 508 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 MCOLN1Q9GZU1 580 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 CYP39A1Q9NYL5 469 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 PCDH10Q9P2E7 1040 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 KCNJ14Q9UNX9 436 aa18.57■□□□□ 0.56
VAMP1-205ENST00000535927 RBBP6Q7Z6E9 1792 aaKnown RBP18.56■□□□□ 0.56
VAMP1-205ENST00000535927 CCDC194A0A1B0GVG4 234 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 VPS37CA5D8V6 355 aaPredicted RBP18.56■□□□□ 0.56
VAMP1-205ENST00000535927 PTPREP23469 700 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 HOXD10P28358 340 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 USP11P51784 963 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 FCGRTP55899 365 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 RPS6P62753 249 aaKnown RBP18.56■□□□□ 0.56
VAMP1-205ENST00000535927 ORC2Q13416 577 aaPredicted RBP18.56■□□□□ 0.56
VAMP1-205ENST00000535927 MUM1L1Q5H9M0 696 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 NOSTRINQ8IVI9 506 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 MSL3Q8N5Y2 521 aaKnown RBP18.56■□□□□ 0.56
VAMP1-205ENST00000535927 IWS1Q96ST2 819 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 A1CFQ9NQ94 594 aaKnown RBP18.56■□□□□ 0.56
VAMP1-205ENST00000535927 HOMER2Q9NSB8 354 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 PCDHA6Q9UN73 950 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 PCDHA8Q9Y5H6 950 aa18.56■□□□□ 0.56
VAMP1-205ENST00000535927 BTBD18B2RXH4 712 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 NFIBO00712 420 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 STAM2O75886 525 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 LACTBP83111 547 aaPredicted RBP18.55■□□□□ 0.56
VAMP1-205ENST00000535927 BAATQ14032 418 aaPredicted RBP18.55■□□□□ 0.56
VAMP1-205ENST00000535927 NONOQ15233 471 aaKnown RBP eCLIP18.55■□□□□ 0.56
VAMP1-205ENST00000535927 RILPL1Q5EBL4 403 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 GPR142Q7Z601 462 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 ZNF467Q7Z7K2 595 aaPredicted RBP18.55■□□□□ 0.56
VAMP1-205ENST00000535927 SYTL5Q8TDW5 730 aaPredicted RBP18.55■□□□□ 0.56
VAMP1-205ENST00000535927 NSUN6Q8TEA1 469 aaKnown RBP18.55■□□□□ 0.56
VAMP1-205ENST00000535927 SOCS4Q8WXH5 440 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 TNFRSF25Q93038 417 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 SHISA4Q96DD7 197 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 ERO1AQ96HE7 468 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 PORCNQ9H237 461 aa18.55■□□□□ 0.56
VAMP1-205ENST00000535927 NOL7Q9UMY1 257 aaKnown RBP18.55■□□□□ 0.56
VAMP1-205ENST00000535927 DNAJC25-GNG10A0A024R161 153 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 POTEB2H3BUK9 544 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 GPR25O00155 361 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 PRMT2P55345 433 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 GRB14Q14449 540 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 USP17L6PQ6QN14 398 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 MOXD1Q6UVY6 613 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 EFCC1Q9HA90 598 aa18.54■□□□□ 0.56
VAMP1-205ENST00000535927 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
VAMP1-205ENST00000535927 FRMPD4Q14CM0 1322 aa18.53■□□□□ 0.56
VAMP1-205ENST00000535927 MGAMO43451 1857 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms