RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 DUSP11O75319 330 aaKnown RBP19.1■□□□□ 0.65
ATL3-202ENST00000535789 RTP1P59025 263 aa19.1■□□□□ 0.65
ATL3-202ENST00000535789 ADCK5Q3MIX3 580 aa19.1■□□□□ 0.65
ATL3-202ENST00000535789 EEPD1Q7L9B9 569 aa19.1■□□□□ 0.65
ATL3-202ENST00000535789 LRRC2Q9BYS8 371 aa19.1■□□□□ 0.65
ATL3-202ENST00000535789 GNEQ9Y223 722 aaKnown RBP19.1■□□□□ 0.65
ATL3-202ENST00000535789 SMPD1P17405 629 aa19.09■□□□□ 0.65
ATL3-202ENST00000535789 EDNRBP24530 442 aa19.09■□□□□ 0.65
ATL3-202ENST00000535789 CST5P28325 142 aaPredicted RBP19.09■□□□□ 0.65
ATL3-202ENST00000535789 SLC39A5Q6ZMH5 540 aa19.09■□□□□ 0.65
ATL3-202ENST00000535789 ZNF654Q8IZM8 581 aa19.09■□□□□ 0.65
ATL3-202ENST00000535789 GDF15Q99988 308 aa19.09■□□□□ 0.65
ATL3-202ENST00000535789 RIOX1Q9H6W3 641 aa19.09■□□□□ 0.65
ATL3-202ENST00000535789 ERICH2A1L162 156 aa19.08■□□□□ 0.64
ATL3-202ENST00000535789 DHX16O60231 1041 aaKnown RBP19.08■□□□□ 0.64
ATL3-202ENST00000535789 GJA9P57773 515 aa19.08■□□□□ 0.64
ATL3-202ENST00000535789 NKX3-2P78367 333 aa19.08■□□□□ 0.64
ATL3-202ENST00000535789 TRIM60Q495X7 471 aa19.08■□□□□ 0.64
ATL3-202ENST00000535789 FBXO11Q86XK2 927 aa19.08■□□□□ 0.64
ATL3-202ENST00000535789 PIGSQ96S52 555 aa19.08■□□□□ 0.64
ATL3-202ENST00000535789 PNMA2Q9UL42 364 aa19.08■□□□□ 0.64
ATL3-202ENST00000535789 ZBTB5O15062 677 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 RXRAP19793 462 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 MCM5P33992 734 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 GHRHRQ02643 423 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 SART3Q15020 963 aaKnown RBP19.07■□□□□ 0.64
ATL3-202ENST00000535789 RNF180Q86T96 592 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 RAB11FIP4Q86YS3 637 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 RGS22Q8NE09 1264 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 SYTL5Q8TDW5 730 aaPredicted RBP19.07■□□□□ 0.64
ATL3-202ENST00000535789 TCEANC2Q96MN5 208 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 MTA3Q9BTC8 594 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 VTA1Q9NP79 307 aa19.07■□□□□ 0.64
ATL3-202ENST00000535789 DDAH1O94760 285 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 PLEKHA8P1O95397 391 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 C6orf222P0C671 652 aaPredicted RBP19.06■□□□□ 0.64
ATL3-202ENST00000535789 MAGEA10P43363 369 aaPredicted RBP19.06■□□□□ 0.64
ATL3-202ENST00000535789 FXR1P51114 621 aaKnown RBP eCLIP19.06■□□□□ 0.64
ATL3-202ENST00000535789 ACLYP53396 1101 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 BEX3Q00994 111 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 TNFAIP2Q03169 654 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 KCNA10Q16322 511 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 C1orf53Q5VUE5 145 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 TLK2Q86UE8 772 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 HOMER1Q86YM7 354 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 NUP133Q8WUM0 1156 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 TAAR1Q96RJ0 339 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 ADD3Q9UEY8 706 aaKnown RBP19.06■□□□□ 0.64
ATL3-202ENST00000535789 ATP11BQ9Y2G3 1177 aa19.06■□□□□ 0.64
ATL3-202ENST00000535789 LOC102724159A0A0B4J2E5 919 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 RBM47A0AV96 593 aaKnown RBP19.05■□□□□ 0.64
ATL3-202ENST00000535789 SLC34A2O95436 690 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 HSD17B4P51659 736 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 EXOSC10Q01780 885 aaKnown RBP19.05■□□□□ 0.64
ATL3-202ENST00000535789 PWP2Q15269 919 aaKnown RBP19.05■□□□□ 0.64
ATL3-202ENST00000535789 TSGA10IPQ3SY00 556 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 CASC1Q6TDU7 716 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 SH3RF1Q7Z6J0 888 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 CATIPQ7Z7H3 387 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 DNERQ8NFT8 737 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 KCNB2Q92953 911 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 TMEM87BQ96K49 555 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 TSEN34Q9BSV6 310 aaKnown RBP19.05■□□□□ 0.64
ATL3-202ENST00000535789 AMNQ9BXJ7 453 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 PDLIM7Q9NR12 457 aa19.05■□□□□ 0.64
ATL3-202ENST00000535789 ARIH2O95376 493 aa19.04■□□□□ 0.64
ATL3-202ENST00000535789 ASGR1P07306 291 aa19.04■□□□□ 0.64
ATL3-202ENST00000535789 LIFRP42702 1097 aa19.04■□□□□ 0.64
ATL3-202ENST00000535789 CMTR1Q8N1G2 835 aaKnown RBP19.04■□□□□ 0.64
ATL3-202ENST00000535789 TANC1Q9C0D5 1861 aa19.04■□□□□ 0.64
ATL3-202ENST00000535789 MOXD2PA6NHM9 499 aa19.03■□□□□ 0.64
ATL3-202ENST00000535789 CPA1P15085 419 aa19.03■□□□□ 0.64
ATL3-202ENST00000535789 SGMS1Q86VZ5 419 aa19.03■□□□□ 0.64
ATL3-202ENST00000535789 SRBD1Q8N5C6 995 aaKnown RBP19.03■□□□□ 0.64
ATL3-202ENST00000535789 NEK1Q96PY6 1258 aa19.03■□□□□ 0.64
ATL3-202ENST00000535789 MAP3K14Q99558 947 aa19.03■□□□□ 0.64
ATL3-202ENST00000535789 SPZ1Q9BXG8 430 aa19.03■□□□□ 0.64
ATL3-202ENST00000535789 MRPL11Q9Y3B7 192 aaKnown RBP19.03■□□□□ 0.64
ATL3-202ENST00000535789 SCN5AQ14524 2016 aa19.03■□□□□ 0.64
ATL3-202ENST00000535789 TRIM43BA6NCK2 446 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 CFBP00751 764 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 ITGB8P26012 769 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 MDM2Q00987 491 aaPredicted RBP19.02■□□□□ 0.64
ATL3-202ENST00000535789 TLE2Q04725 743 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 DUSP28Q4G0W2 176 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 PIBF1Q8WXW3 757 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 COPS5Q92905 334 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 TRIM43Q96BQ3 446 aaPredicted RBP19.02■□□□□ 0.64
ATL3-202ENST00000535789 STARD7Q9NQZ5 370 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 PCDHA1Q9Y5I3 950 aa19.02■□□□□ 0.64
ATL3-202ENST00000535789 GBF1Q92538 1859 aa19.01■□□□□ 0.63
ATL3-202ENST00000535789 TRIP12Q14669 1992 aaPredicted RBP19.01■□□□□ 0.63
ATL3-202ENST00000535789 PNMA6FA0A0J9YX94 578 aa19.01■□□□□ 0.63
ATL3-202ENST00000535789 SOX1O00570 391 aaPredicted RBP19.01■□□□□ 0.63
ATL3-202ENST00000535789 HOXA13P31271 388 aaPredicted RBP19.01■□□□□ 0.63
ATL3-202ENST00000535789 BMP8BP34820 402 aa19.01■□□□□ 0.63
ATL3-202ENST00000535789 HSPA4P34932 840 aa19.01■□□□□ 0.63
ATL3-202ENST00000535789 PDE4DQ08499 809 aa19.01■□□□□ 0.63
ATL3-202ENST00000535789 GNASQ5JWF2 1037 aa19.01■□□□□ 0.63
ATL3-202ENST00000535789 RNF20Q5VTR2 975 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms