RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 ZNHIT6Q9NWK9 470 aaKnown RBP15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 MAD2L2Q9UI95 211 aa15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 PCDHA4Q9UN74 947 aa15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 NUP98P52948 1817 aa15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 PICALMQ13492 652 aa15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 MIIPQ5JXC2 388 aa15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 SECISBP2LQ93073 1101 aaKnown RBP15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 PACSIN1Q9BY11 444 aa15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 CRNKL1Q9BZJ0 848 aaKnown RBP15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 RBM28Q9NW13 759 aaKnown RBP15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 CWC15Q9P013 229 aaKnown RBP15.49■□□□□ 0.07
LPCAT3-203ENST00000535479 BCL9O00512 1426 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 KLRF2D3W0D1 207 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 H7C1D1 291 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 SNAP25P60880 206 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 KIF5AQ12840 1032 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 FBXW10Q5XX13 1052 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 IKZF4Q9H2S9 585 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 GPCPD1Q9NPB8 672 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 RBM12Q9NTZ6 932 aaKnown RBP15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 CAPN11Q9UMQ6 739 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 GOLGA6BA6NDN3 693 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 SMCO2A6NFE2 343 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 LRRC10BA6NIK2 292 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 KRT86O43790 486 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 HIBADHP31937 336 aaKnown RBP15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 SLC16A2P36021 539 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 PDE4CQ08493 712 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 MKRN4PQ13434 485 aaPredicted RBP15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 NFIXQ14938 502 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 MUM1L1Q5H9M0 696 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 TBCKQ8TEA7 893 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 MTMR8Q96EF0 704 aa15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.48■□□□□ 0.07
LPCAT3-203ENST00000535479 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 GOLGA6CA6NDK9 693 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 SLC37A4O43826 429 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 GOLGA6DP0CG33 693 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 CCDC181Q5TID7 509 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 KLHL7Q8IXQ5 586 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 OR2W6PQ8NHA6 318 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 FAM71BQ8TC56 605 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 HNRNPLLQ8WVV9 542 aaKnown RBP15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 P2RX5Q93086 422 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 TMEM47Q9BQJ4 181 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 TRIM9Q9C026 710 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 HAUS4Q9H6D7 363 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 GOLGA6AQ9NYA3 693 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 DNAJC7Q99615 494 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 NFU1Q9UMS0 254 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 HYOU1Q9Y4L1 999 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 ITIH6Q6UXX5 1313 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 ZC3H4Q9UPT8 1303 aaKnown RBP15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 MYMKA6NI61 221 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 ERVV-1B6SEH8 477 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 PRPF6O94906 941 aaKnown RBP15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 KIF11P52732 1056 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 GNGT1P63211 74 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 SPA17Q15506 151 aa15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 SHROOM1Q2M3G4 852 aaPredicted RBP15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
LPCAT3-203ENST00000535479 PSMD14O00487 310 aa15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 TNNI2P48788 182 aa15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 CARSP49589 748 aaKnown RBP15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 SPAG1Q07617 926 aa15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 ECM1Q16610 540 aa15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 CCNI2Q6ZMN8 369 aaPredicted RBP15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 ADAT2Q7Z6V5 191 aaKnown RBP15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 DDX42Q86XP3 938 aaKnown RBP eCLIP15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 CREG2Q8IUH2 290 aa15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 PCDHA13Q9Y5I0 950 aa15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 PDS5AQ29RF7 1337 aaKnown RBP15.46■□□□□ 0.07
LPCAT3-203ENST00000535479 USP17L5A8MUK1 530 aa15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 ATP2C2O75185 946 aa15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 SRGNP10124 158 aa15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 HPDP32754 393 aaPredicted RBP15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 DDB1Q16531 1140 aa15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 TRMT1LQ7Z2T5 733 aaKnown RBP15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 ZNF444Q8N0Y2 327 aaPredicted RBP15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 BCAS4Q8TDM0 211 aa15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 CCDC51Q96ER9 411 aa15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 RMND1Q9NWS8 449 aa15.46■□□□□ 0.06
LPCAT3-203ENST00000535479 FAM196BA6NMK8 535 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 STXBP3O00186 592 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 DDAH1O94760 285 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 CYLC1P35663 651 aaPredicted RBP15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 GUCY1A3Q02108 690 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 LLGL1Q15334 1064 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 ELOA2Q8IYF1 753 aaPredicted RBP15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 MMTAG2Q9BU76 263 aaKnown RBP15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 ANAPC4Q9UJX5 808 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 GLI1P08151 1106 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 ACTN1P12814 892 aa15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 LONP1P36776 959 aaKnown RBP15.45■□□□□ 0.06
LPCAT3-203ENST00000535479 CACNA2D4Q7Z3S7 1137 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms