RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 KCNA10Q16322 511 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 SLC35G1Q2M3R5 365 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 USH1GQ495M9 461 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 ERICH6BQ5W0A0 696 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 CHST3Q7LGC8 479 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 MCF2L2Q86YR7 1114 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 SAMD3Q8N6K7 520 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 NUP133Q8WUM0 1156 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 LY9Q9HBG7 655 aa17.82■□□□□ 0.44
MSRB3-205ENST00000535239 MAP3K20Q9NYL2 800 aaKnown RBP17.82■□□□□ 0.44
MSRB3-205ENST00000535239 TRIOBPQ9H2D6 2365 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.81■□□□□ 0.44
MSRB3-205ENST00000535239 B4DLN1 442 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
MSRB3-205ENST00000535239 SYN1P17600 705 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 CALML3P27482 149 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 SMARCA1P28370 1054 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 LIFRP42702 1097 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 FXR1P51114 621 aaKnown RBP eCLIP17.81■□□□□ 0.44
MSRB3-205ENST00000535239 MRPL12P52815 198 aaKnown RBP17.81■□□□□ 0.44
MSRB3-205ENST00000535239 TRAF1Q13077 416 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 FERMT2Q96AC1 680 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 MPHOSPH6Q99547 160 aaKnown RBP17.81■□□□□ 0.44
MSRB3-205ENST00000535239 VAT1LQ9HCJ6 419 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 PDGFCQ9NRA1 345 aa17.81■□□□□ 0.44
MSRB3-205ENST00000535239 MYH6P13533 1939 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 MYADML2A6NDP7 307 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 PRC1O43663 620 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 CYTH3O43739 400 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 DHX16O60231 1041 aaKnown RBP17.8■□□□□ 0.44
MSRB3-205ENST00000535239 DDAH1O94760 285 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 C6orf222P0C671 652 aaPredicted RBP17.8■□□□□ 0.44
MSRB3-205ENST00000535239 SMPD1P17405 629 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 MAGEA10P43363 369 aaPredicted RBP17.8■□□□□ 0.44
MSRB3-205ENST00000535239 DUSP28Q4G0W2 176 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 GNASQ5JWF2 1037 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 RNF20Q5VTR2 975 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 ANKRD33Q7Z3H0 272 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 SYTL5Q8TDW5 730 aaPredicted RBP17.8■□□□□ 0.44
MSRB3-205ENST00000535239 TBC1D5Q92609 795 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 TOX2Q96NM4 488 aa17.8■□□□□ 0.44
MSRB3-205ENST00000535239 DDX49Q9Y6V7 483 aaKnown RBP17.8■□□□□ 0.44
MSRB3-205ENST00000535239 SH2B2O14492 632 aaPredicted RBP17.79■□□□□ 0.44
MSRB3-205ENST00000535239 OPLAHO14841 1288 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 PPP1R11O60927 126 aaPredicted RBP17.79■□□□□ 0.44
MSRB3-205ENST00000535239 NEFLP07196 543 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 ASGR1P07306 291 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 CDK7P50613 346 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 HSD17B4P51659 736 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 IRX5P78411 483 aaPredicted RBP17.79■□□□□ 0.44
MSRB3-205ENST00000535239 COL9A3Q14050 684 aaPredicted RBP17.79■□□□□ 0.44
MSRB3-205ENST00000535239 TRIM60Q495X7 471 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
MSRB3-205ENST00000535239 IWS1Q96ST2 819 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 ATP11BQ9Y2G3 1177 aa17.79■□□□□ 0.44
MSRB3-205ENST00000535239 PNMA6FA0A0J9YX94 578 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 TLE2Q04725 743 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 TLK2Q86UE8 772 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 SGMS1Q86VZ5 419 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 ZNF654Q8IZM8 581 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 NSUN6Q8TEA1 469 aaKnown RBP17.78■□□□□ 0.44
MSRB3-205ENST00000535239 KCNB2Q92953 911 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 GLT1D1Q96MS3 346 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 LZTS2Q9BRK4 669 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 SPZ1Q9BXG8 430 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
MSRB3-205ENST00000535239 STARD7Q9NQZ5 370 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 PCDHA1Q9Y5I3 950 aa17.78■□□□□ 0.44
MSRB3-205ENST00000535239 NKRFO15226 690 aaKnown RBP eCLIP17.77■□□□□ 0.44
MSRB3-205ENST00000535239 CABYRO75952 493 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 KIF5BP33176 963 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 EXOSC10Q01780 885 aaKnown RBP17.77■□□□□ 0.44
MSRB3-205ENST00000535239 PDE4DQ08499 809 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 PIGSQ96S52 555 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 SEZ6LQ9BYH1 1024 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 WDR11Q9BZH6 1224 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 AP5M1Q9H0R1 490 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 PDLIM7Q9NR12 457 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
MSRB3-205ENST00000535239 DYNC1LI2O43237 492 aaPredicted RBP17.76■□□□□ 0.43
MSRB3-205ENST00000535239 CALM1P0DP23 149 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 CALM2P0DP24 149 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 CALM3P0DP25 149 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 GNAQP50148 359 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 KRT32Q14532 448 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 FSCN1Q16658 493 aaKnown RBP17.76■□□□□ 0.43
MSRB3-205ENST00000535239 TMEM63BQ5T3F8 832 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
MSRB3-205ENST00000535239 SLC43A3Q8NBI5 491 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 CTCFLQ8NI51 663 aaPredicted RBP17.76■□□□□ 0.43
MSRB3-205ENST00000535239 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 NEK1Q96PY6 1258 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 RMDN3Q96TC7 470 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 PRKAG2Q9UGJ0 569 aa17.76■□□□□ 0.43
MSRB3-205ENST00000535239 MROH7Q68CQ1 1323 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms